RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TRAV21A0A0B4J279 112 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 GNRH2O43555 120 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 MPC2O95563 127 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 RPL12P30050 165 aaKnown RBP9.75□□□□□ -0.85
PAF1-202ENST00000416728 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 A0A1W2PPV4 95 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 F6UZH7 168 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 SSNA1O43805 119 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 INAFM2P0DMQ5 153 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 PQLC2Q6ZP29 291 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 NHLRC2Q8NBF2 726 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 FRZBQ92765 325 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 TREM1Q9NP99 234 aa9.75□□□□□ -0.85
PAF1-202ENST00000416728 TRAV8-1A0A0A6YYK1 113 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 TYMSP04818 313 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 PPT1P50897 306 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 ACOT6Q3I5F7 207 aaPredicted RBP9.74□□□□□ -0.85
PAF1-202ENST00000416728 Q5VSD8 79 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 ARL6IP6Q8N6S5 226 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 MARVELD1Q9BSK0 173 aa9.74□□□□□ -0.85
PAF1-202ENST00000416728 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 PSCAO43653 123 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 GATA1P15976 413 aaPredicted RBP9.73□□□□□ -0.85
PAF1-202ENST00000416728 GCSHP23434 173 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 TIRAPP58753 221 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 IFITM3Q01628 133 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 TVP23CQ96ET8 276 aa9.73□□□□□ -0.85
PAF1-202ENST00000416728 RAB2AP61019 212 aa9.72□□□□□ -0.85
PAF1-202ENST00000416728 GNG5P63218 68 aa9.72□□□□□ -0.85
PAF1-202ENST00000416728 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
PAF1-202ENST00000416728 NDFIP1Q9BT67 221 aa9.72□□□□□ -0.85
PAF1-202ENST00000416728 WFDC1Q9HC57 220 aa9.72□□□□□ -0.85
PAF1-202ENST00000416728 FBLL1A6NHQ2 334 aaKnown RBP9.71□□□□□ -0.86
PAF1-202ENST00000416728 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
PAF1-202ENST00000416728 LINC01556Q5JQF7 62 aa9.71□□□□□ -0.86
PAF1-202ENST00000416728 TRAV8-6A0A0B4J262 113 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
PAF1-202ENST00000416728 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 OR10G9Q8NGN4 311 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 OR10G7Q8NGN6 311 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 SGK494Q96LW2 274 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
PAF1-202ENST00000416728 IGLV5-52A0A0A0MRZ9 124 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 CIDEAO60543 219 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
PAF1-202ENST00000416728 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 DEFA1P59665 94 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 DEFA3P59666 94 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 RHOHQ15669 191 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
PAF1-202ENST00000416728 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
PAF1-202ENST00000416728 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 K7EQM0 130 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 CDC34P49427 236 aaPredicted RBP9.68□□□□□ -0.86
PAF1-202ENST00000416728 CFAP126Q5VTH2 177 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 Q9HAA7 133 aa9.68□□□□□ -0.86
PAF1-202ENST00000416728 IGHV3-73A0A0B4J1V6 119 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 TAAR5O14804 337 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 RS1O15537 224 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 TCRAP04437 139 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
PAF1-202ENST00000416728 HAMPP81172 84 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 TMEM70Q9BUB7 260 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 C11orf21Q9P2W6 132 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 FAT1Q14517 4588 aa9.67□□□□□ -0.86
PAF1-202ENST00000416728 FAM229AH3BQW9 127 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 GCGP01275 180 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 STAG3L2P0CL84 134 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 STAG3L3P0CL85 134 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 ZFP69Q49AA0 526 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 LELP1Q5T871 98 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 Q6ZNX1 250 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 HSD17B11Q8NBQ5 300 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 HERC1Q15751 4861 aa9.66□□□□□ -0.86
PAF1-202ENST00000416728 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
PAF1-202ENST00000416728 GCHFRP30047 84 aa9.65□□□□□ -0.86
PAF1-202ENST00000416728 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
PAF1-202ENST00000416728 Q8N814 137 aa9.65□□□□□ -0.86
PAF1-202ENST00000416728 TMEM75Q8N9X5 138 aa9.65□□□□□ -0.86
PAF1-202ENST00000416728 OR2G3Q8NGZ4 309 aa9.65□□□□□ -0.86
PAF1-202ENST00000416728 RAB24Q969Q5 203 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms