RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 HLA-DQB1P01920 261 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 SHBGP04278 402 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 RPSAP08865 295 aaKnown RBP0.87□□□□□ -2.27
LINC00428-201ENST00000415620 MGST1P10620 155 aaKnown RBP0.87□□□□□ -2.27
LINC00428-201ENST00000415620 RPS20P60866 119 aaKnown RBP0.87□□□□□ -2.27
LINC00428-201ENST00000415620 UBE2MP61081 183 aaKnown RBP0.87□□□□□ -2.27
LINC00428-201ENST00000415620 RBX1P62877 108 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 ERHP84090 104 aaKnown RBP0.87□□□□□ -2.27
LINC00428-201ENST00000415620 TMED1Q13445 227 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 MOBPQ13875 183 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 SSX1Q16384 188 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 STEAP1BQ6NZ63 245 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 BPIFCQ8NFQ6 507 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 OR52I1Q8NGK6 324 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 OR2T35Q8NGX2 323 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 OR4A16Q8NH70 328 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 ACY3Q96HD9 319 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 ODF3Q96PU9 254 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 SH3GL1Q99961 368 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 IMUPQ9GZP8 106 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 RAB17Q9H0T7 212 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 NPVFQ9HCQ7 196 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 C8orf4Q9NR00 106 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 SLC39A9Q9NUM3 307 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 PLEKHJ1Q9NW61 149 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 PRNDQ9UKY0 176 aa0.87□□□□□ -2.27
LINC00428-201ENST00000415620 IGKV1D-37A0A075B6S9 117 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 TRAV8-7A0A075B6U6 113 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 FAM236DA0A1B0GTK5 79 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 ANKRD65E5RJM6 399 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 H3BTX0 84 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 M0R2P5 195 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 CORTO00230 105 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SLC17A3O00476 420 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 MRPS12O15235 138 aaKnown RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SLC25A20O43772 301 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 PRKYO43930 277 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 WBP4O75554 376 aaKnown RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SNAPC5O75971 98 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 TNFAIP8O95379 198 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 PTTG1O95997 202 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SPINK1P00995 79 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 GPX1P07203 203 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 OR4E1P0C645 316 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 FAM236CP0DP71 79 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 GZMBP10144 247 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SNCAP37840 140 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 RPL28P46779 137 aaKnown RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SMIM11AP58511 58 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 PPP3R1P63098 170 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SYCNQ0VAF6 134 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 ERCC8Q13216 396 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 Q499Y3 187 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 CFAP161Q6P656 301 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 JAGN1Q8N5M9 183 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 OR8J3Q8NGG0 315 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 OR51H1Q8NH63 302 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 RAB2BQ8WUD1 216 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 TRUB1Q8WWH5 349 aaKnown RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 FAM162AQ96A26 154 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 FAM19A4Q96LR4 140 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 OBSCN-AS1Q96MR7 158 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 CMSS1Q9BQ75 279 aaKnown RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 ZNF2Q9BSG1 426 aaPredicted RBP0.86□□□□□ -2.27
LINC00428-201ENST00000415620 SPXQ9BT56 116 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 TMEM59Q9BXS4 323 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 COMMD9Q9P000 198 aa0.86□□□□□ -2.27
LINC00428-201ENST00000415620 TRBV6-8A0A0A6YYG3 113 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 A0A0A6YYH2 397 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 TRAV8-4A0A0B4J246 113 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 A6NJ64 397 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 GNRH2O43555 120 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 APOMO95445 188 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 DIRAS3O95661 229 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 P01737 135 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 CDK1P06493 297 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 TBPP20226 339 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 RPL5P46777 297 aaKnown RBP0.85□□□□□ -2.27
LINC00428-201ENST00000415620 FGF8P55075 233 aaPredicted RBP0.85□□□□□ -2.27
LINC00428-201ENST00000415620 STX3Q13277 289 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 FLOT2Q14254 428 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 C6orf99Q4VX62 202 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 IDNKQ5T6J7 187 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 EXOC3-AS1Q8N2X6 119 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 TMEM252Q8N6L7 170 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 ZFAND2AQ8N6M9 145 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 NKAIN3Q8N8D7 197 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 NUP35Q8NFH5 326 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 OR4D5Q8NGN0 318 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 OR13C8Q8NGS7 320 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 OR2G3Q8NGZ4 309 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 LRRC20Q8TCA0 184 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 RAB3CQ96E17 227 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 MRPL53Q96EL3 112 aaKnown RBP0.85□□□□□ -2.27
LINC00428-201ENST00000415620 PYURFQ96I23 114 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 S100A14Q9HCY8 104 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 ARGLU1Q9NWB6 273 aaPredicted RBP0.85□□□□□ -2.27
LINC00428-201ENST00000415620 SSR3Q9UNL2 185 aa0.85□□□□□ -2.27
LINC00428-201ENST00000415620 PHLDA3Q9Y5J5 127 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms