RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 UFC1Q9Y3C8 167 aa11.76□□□□□ -0.53
SHMT2-202ENST00000414700 SORL1Q92673 2214 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 SYS1-DBNDD2H3BUS1 97 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 K7EMT4 169 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-202ENST00000414700 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-202ENST00000414700 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 SMPXQ9UHP9 88 aa11.75□□□□□ -0.53
SHMT2-202ENST00000414700 PKD1L1Q8TDX9 2849 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 CHEK1O14757 476 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 C16orf54Q6UWD8 224 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 GLMPQ8WWB7 406 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 LOC102724200A0A096LPH7 203 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-202ENST00000414700 TRAV8-6A0A0B4J262 113 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 S100A7AQ86SG5 101 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 TMEM14CQ9P0S9 112 aa11.74□□□□□ -0.53
SHMT2-202ENST00000414700 ANK2Q01484 3957 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 RIPPLY3P57055 190 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 ATP5L2Q7Z4Y8 100 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 NUP35Q8NFH5 326 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 STXBP6Q8NFX7 210 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 CHCHD1Q96BP2 118 aaKnown RBP11.73□□□□□ -0.53
SHMT2-202ENST00000414700 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
SHMT2-202ENST00000414700 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-202ENST00000414700 HIST1H1EP10412 219 aaKnown RBP11.72□□□□□ -0.53
SHMT2-202ENST00000414700 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
SHMT2-202ENST00000414700 SPATA3Q8NHX4 192 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 IGKV3-7A0A075B6H7 116 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 FER1L6-AS1Q8NA97 138 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 SVIPQ8NHG7 77 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
SHMT2-202ENST00000414700 IGHV1-24A0A0C4DH33 117 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 SAP30O75446 220 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 CSN3P07498 182 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 MYCNOSP40205 109 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 IGFL4Q6B9Z1 124 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 PMCHL2Q9BQD1 86 aa11.71□□□□□ -0.53
SHMT2-202ENST00000414700 CMYA5Q8N3K9 4069 aa11.71□□□□□ -0.54
SHMT2-202ENST00000414700 TRBV19A0A075B6N1 114 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 GAGE10A6NGK3 116 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 G3V4G9 280 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 OVOL1O14753 267 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 SEC11AP67812 179 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 UFSP1Q6NVU6 142 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 NHLRC2Q8NBF2 726 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-202ENST00000414700 PEMTQ9UBM1 199 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 C7orf71A4D174 169 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 PF4P02776 101 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
SHMT2-202ENST00000414700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 EXOC3-AS1Q8N2X6 119 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 C3orf56Q8N813 242 aa11.7□□□□□ -0.54
SHMT2-202ENST00000414700 ZNF785A8K8V0 405 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 OR5AL1P0C617 328 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 LINC00173Q6ZV60 143 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 A0A087X0K7 114 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 GPR82Q96P67 336 aa11.69□□□□□ -0.54
SHMT2-202ENST00000414700 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
SHMT2-202ENST00000414700 CAMPP49913 170 aa11.68□□□□□ -0.54
SHMT2-202ENST00000414700 MAP1LC3CQ9BXW4 147 aa11.68□□□□□ -0.54
SHMT2-202ENST00000414700 Q9H3A6 140 aa11.68□□□□□ -0.54
SHMT2-202ENST00000414700 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 FAM231BA6NCW3 169 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 COX8AP10176 69 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 HBBP68871 147 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 C2orf91Q6ZV80 131 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 MDFIQ99750 246 aa11.67□□□□□ -0.54
SHMT2-202ENST00000414700 PGPA6NDG6 321 aa11.66□□□□□ -0.54
SHMT2-202ENST00000414700 M0R3E3 92 aa11.66□□□□□ -0.54
SHMT2-202ENST00000414700 RNF182Q8N6D2 247 aa11.66□□□□□ -0.54
SHMT2-202ENST00000414700 AP1S3Q96PC3 154 aa11.66□□□□□ -0.54
SHMT2-202ENST00000414700 TRAV8-2A0A0B4J237 113 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 K7EP34 96 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 GNG5P63218 68 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 PDE6HQ13956 83 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 HSPB8Q9UJY1 196 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 H3BRM9 83 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 PEX7O00628 323 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 DEFB114Q30KQ6 69 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 CD300EQ496F6 205 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-202ENST00000414700 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 LINC00479Q96M42 142 aa11.65□□□□□ -0.54
SHMT2-202ENST00000414700 SOCS3O14543 225 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms