RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 IGKV1-39P01597 117 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 IGKV1D-39P04432 117 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 CCL5P13501 91 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 COX7A1P24310 79 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 PEBP1P30086 187 aaKnown RBP2.56□□□□□ -2
SF3B1-203ENST00000414174 RPL27AP46776 148 aaKnown RBP2.56□□□□□ -2
SF3B1-203ENST00000414174 XCL1P47992 114 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 DYNLT1P63172 113 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 ESRGQ1W209 222 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 KRTAP27-1Q3LI81 207 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 ODF3L2Q3SX64 289 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
SF3B1-203ENST00000414174 C10orf25Q5T742 122 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 NCBP2-AS2Q69YL0 99 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 CMC2Q9NRP2 79 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 CELA1Q9UNI1 258 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 SMAD5-AS1Q9Y6J3 95 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 CPS1P31327 1500 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 TICRRQ7Z2Z1 1910 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 DYSFO75923 2080 aa2.56□□□□□ -2
SF3B1-203ENST00000414174 IGLV3-12A0A075B6K2 115 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 IGKV3D-20A0A0C4DH25 116 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 PINLYPA6NC86 204 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 SLC25A20O43772 301 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 SLIT2O94813 1529 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 IL4P05112 153 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 NPPCP23582 126 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 HCFC1P51610 2035 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 FXYD2P54710 66 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 DSCR9P59020 149 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 TSPEAR-AS2P59090 65 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 Q0VFX4 171 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 PLCH1Q4KWH8 1693 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 SPANXN1Q5VSR9 72 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 MICAL3Q7RTP6 2002 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 VMO1Q7Z5L0 202 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 IFI27L1Q96BM0 104 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 CHCHD1Q96BP2 118 aaKnown RBP2.55□□□□□ -2
SF3B1-203ENST00000414174 ZNF524Q96C55 264 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 SCGB3A1Q96QR1 104 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 TRPM7Q96QT4 1865 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 OCR1Q9BZK8 76 aa2.55□□□□□ -2
SF3B1-203ENST00000414174 PKD1L3Q7Z443 1732 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 KIF21BO75037 1637 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 COL16A1Q07092 1604 aaPredicted RBP2.54□□□□□ -2
SF3B1-203ENST00000414174 PHRF1Q9P1Y6 1649 aaKnown RBP2.54□□□□□ -2
SF3B1-203ENST00000414174 ADGRB2O60241 1585 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-43A0A0B4J1X8 118 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-72A0A0B4J1Y9 119 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 SRRM5B3KS81 715 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 FAM72CH0Y354 149 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 H3BMM0 161 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 NTN3O00634 580 aaPredicted RBP2.54□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-11P01762 117 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 PRH1P02810 166 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 NOVP48745 357 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 NANOS2P60321 138 aaKnown RBP2.54□□□□□ -2
SF3B1-203ENST00000414174 SYCNQ0VAF6 134 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 FAM72DQ6L9T8 149 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 NDUFA11Q86Y39 141 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 ORMDL3Q8N138 153 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 ZFAND2AQ8N6M9 145 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 PFN4Q8NHR9 129 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 UBE2WQ96B02 151 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 TMEM141Q96I45 108 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 Q96M85 177 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 C11orf1Q9H5F2 150 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 NHP2Q9NX24 153 aaKnown RBP2.54□□□□□ -2
SF3B1-203ENST00000414174 LRRK1Q38SD2 2015 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 TJP1Q07157 1748 aa2.54□□□□□ -2
SF3B1-203ENST00000414174 C5P01031 1676 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 KDM6BO15054 1643 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 POLEQ07864 2286 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 HEATR5AQ86XA9 2040 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 MIA3Q5JRA6 1907 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 TRBV7-3A0A075B6L6 115 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV4-4A0A075B6R2 117 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV4-30-2A0A087WSY4 118 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 TRBV7-1A0A0A6YYK4 115 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 A0A0B4J2C4 111 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-35A0A0C4DH35 117 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 A0A1B0GWA3 101 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-13P01766 116 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV4-34P06331 123 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 CCL3P10147 92 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 FXYD7P58549 80 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 SNRPGP62308 76 aaKnown RBP2.53□□□□□ -2
SF3B1-203ENST00000414174 S100A7L2Q5SY68 101 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 REG3GQ6UW15 175 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 LYPD2Q6UXB3 125 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 Q6ZRP5 223 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 FAM223AQ8IWN6 122 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 DYNLRB2Q8TF09 96 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 ATXN7L3BQ96GX2 97 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 TIMM21Q9BVV7 248 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 NDUFA12Q9UI09 145 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms