RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NDFIP1Q9BT67 221 aa18.17■□□□□ 0.5
VEGFA-207ENST00000413642 CRYBA4P53673 196 aa18.16■□□□□ 0.5
VEGFA-207ENST00000413642 FLI1Q01543 452 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-207ENST00000413642 SOHLH1Q5JUK2 328 aa18.16■□□□□ 0.5
VEGFA-207ENST00000413642 CYB561D1Q8N8Q1 229 aa18.16■□□□□ 0.5
VEGFA-207ENST00000413642 RASL10AQ92737 203 aa18.16■□□□□ 0.5
VEGFA-207ENST00000413642 TRAV34A0A0B4J273 112 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 A0A1W2PRE2 83 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 K7EQM0 130 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 KRTAP1-5Q9BYS1 174 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 PRO0255Q9UI72 69 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 HHLA3Q9XRX5 114 aa18.15■□□□□ 0.5
VEGFA-207ENST00000413642 MRPS16Q9Y3D3 137 aaKnown RBP18.15■□□□□ 0.5
VEGFA-207ENST00000413642 GCGP01275 180 aa18.14■□□□□ 0.49
VEGFA-207ENST00000413642 KCNRGQ8N5I3 272 aa18.14■□□□□ 0.49
VEGFA-207ENST00000413642 SDF2L1Q9HCN8 221 aa18.14■□□□□ 0.49
VEGFA-207ENST00000413642 TRGV4A0A0C4DH28 118 aa18.13■□□□□ 0.49
VEGFA-207ENST00000413642 TMEM75Q8N9X5 138 aa18.13■□□□□ 0.49
VEGFA-207ENST00000413642 UPK3BQ9BT76 320 aa18.13■□□□□ 0.49
VEGFA-207ENST00000413642 IFNA7P01567 189 aa18.12■□□□□ 0.49
VEGFA-207ENST00000413642 FHITP49789 147 aa18.12■□□□□ 0.49
VEGFA-207ENST00000413642 C6orf223Q8N319 242 aa18.12■□□□□ 0.49
VEGFA-207ENST00000413642 ICOSQ9Y6W8 199 aa18.12■□□□□ 0.49
VEGFA-207ENST00000413642 MAP1LC3B2A6NCE7 125 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 FAM74A7A6NL05 159 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 M0R2P5 195 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 TNP2Q05952 138 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 KCNS1Q96KK3 526 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 MAP1LC3BQ9GZQ8 125 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 MUC4Q99102 2169 aa18.11■□□□□ 0.49
VEGFA-207ENST00000413642 SMUG1Q53HV7 270 aa18.1■□□□□ 0.49
VEGFA-207ENST00000413642 SLAQ13239 276 aa18.09■□□□□ 0.49
VEGFA-207ENST00000413642 ZNF345Q14585 488 aa18.09■□□□□ 0.49
VEGFA-207ENST00000413642 PEX7O00628 323 aa18.08■□□□□ 0.48
VEGFA-207ENST00000413642 PFN1P07737 140 aaKnown RBP18.08■□□□□ 0.48
VEGFA-207ENST00000413642 OR4C5Q8NGB2 326 aa18.08■□□□□ 0.48
VEGFA-207ENST00000413642 ARL2-SNX15V9GYD0 113 aa18.08■□□□□ 0.48
VEGFA-207ENST00000413642 HERC2O95714 4834 aa18.08■□□□□ 0.48
VEGFA-207ENST00000413642 TRAV4A0A0B4J268 109 aa18.07■□□□□ 0.48
VEGFA-207ENST00000413642 HMSDA8MTL9 139 aa18.07■□□□□ 0.48
VEGFA-207ENST00000413642 C9JCJ5 164 aa18.07■□□□□ 0.48
VEGFA-207ENST00000413642 SAPCD1Q5SSQ6 148 aa18.07■□□□□ 0.48
VEGFA-207ENST00000413642 MRPL23Q16540 153 aaKnown RBP18.06■□□□□ 0.48
VEGFA-207ENST00000413642 ZFP69Q49AA0 526 aa18.06■□□□□ 0.48
VEGFA-207ENST00000413642 LYPD5Q6UWN5 251 aa18.06■□□□□ 0.48
VEGFA-207ENST00000413642 KIAA1109Q2LD37 5005 aa18.06■□□□□ 0.48
VEGFA-207ENST00000413642 FBLL1A6NHQ2 334 aaKnown RBP18.05■□□□□ 0.48
VEGFA-207ENST00000413642 K7EQD1 137 aa18.05■□□□□ 0.48
VEGFA-207ENST00000413642 GYPEP15421 78 aa18.05■□□□□ 0.48
VEGFA-207ENST00000413642 DPPA3Q6W0C5 159 aa18.05■□□□□ 0.48
VEGFA-207ENST00000413642 LOC100131303A0A0U1RQF7 123 aa18.04■□□□□ 0.48
VEGFA-207ENST00000413642 BCL2L11O43521 198 aa18.04■□□□□ 0.48
VEGFA-207ENST00000413642 NXPH4O95158 308 aa18.04■□□□□ 0.48
VEGFA-207ENST00000413642 Q86TA4 180 aa18.04■□□□□ 0.48
VEGFA-207ENST00000413642 C9orf85Q96MD7 179 aa18.04■□□□□ 0.48
VEGFA-207ENST00000413642 ZNF471Q9BX82 626 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-207ENST00000413642 IGKV3D-20A0A0C4DH25 116 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 A0A0D9SG52 128 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 A0A1B0GV50 99 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 ZNF876PQ49A33 203 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 TTC32Q5I0X7 151 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 NEGR1Q7Z3B1 354 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 FAM213BQ8TBF2 198 aa18.03■□□□□ 0.48
VEGFA-207ENST00000413642 DYNC1H1Q14204 4646 aaKnown RBP18.02■□□□□ 0.48
VEGFA-207ENST00000413642 SEC11BP0C7V7 166 aa18.02■□□□□ 0.48
VEGFA-207ENST00000413642 RNASE3P12724 160 aaKnown RBP18.02■□□□□ 0.48
VEGFA-207ENST00000413642 PPT1P50897 306 aa18.02■□□□□ 0.48
VEGFA-207ENST00000413642 HIST1H2BAQ96A08 127 aa18.02■□□□□ 0.48
VEGFA-207ENST00000413642 NKX6-2Q9C056 277 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-207ENST00000413642 PKD1P98161 4303 aa18.02■□□□□ 0.47
VEGFA-207ENST00000413642 KANTRA0A1W2PQU2 76 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 PGPEP1LA6NFU8 196 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 SRIP30626 198 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 CRIP1P50238 77 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 CST9LP1Q5W188 147 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 ZNF575Q86XF7 245 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 STOML3Q8TAV4 291 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 SFT2D1Q8WV19 159 aa18.01■□□□□ 0.47
VEGFA-207ENST00000413642 SIVA1O15304 175 aa18■□□□□ 0.47
VEGFA-207ENST00000413642 PCNPQ8WW12 178 aaKnown RBP18■□□□□ 0.47
VEGFA-207ENST00000413642 DNAH11Q96DT5 4516 aa18■□□□□ 0.47
VEGFA-207ENST00000413642 IGHV3-73A0A0B4J1V6 119 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 A0A1W2PPQ1 181 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 FABP5P3A8MUU1 101 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 RS1O15537 224 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 PAGE4O60829 102 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 GATA1P15976 413 aaPredicted RBP17.99■□□□□ 0.47
VEGFA-207ENST00000413642 ZNF506Q5JVG8 444 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 CFAP126Q5VTH2 177 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 TMUB2Q71RG4 321 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 MBD3L1Q8WWY6 194 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 ZC2HC1AQ96GY0 325 aa17.99■□□□□ 0.47
VEGFA-207ENST00000413642 ORM1P02763 201 aa17.98■□□□□ 0.47
VEGFA-207ENST00000413642 UMAD1C9J7I0 102 aa17.96■□□□□ 0.47
VEGFA-207ENST00000413642 PFDN1O60925 122 aa17.96■□□□□ 0.47
VEGFA-207ENST00000413642 M0R036 132 aa17.95■□□□□ 0.46
VEGFA-207ENST00000413642 SH2D1AO60880 128 aa17.95■□□□□ 0.46
VEGFA-207ENST00000413642 LINC00315P59091 139 aa17.95■□□□□ 0.46
VEGFA-207ENST00000413642 UBE2G1P62253 170 aa17.95■□□□□ 0.46
VEGFA-207ENST00000413642 WFDC10BQ8IUB3 73 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms