RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
ATRIP-204ENST00000412052 FLNCQ14315 2725 aa10.85□□□□□ -0.67
ATRIP-204ENST00000412052 K7EP34 96 aa10.84□□□□□ -0.67
ATRIP-204ENST00000412052 RIPPLY3P57055 190 aa10.84□□□□□ -0.67
ATRIP-204ENST00000412052 GPHB5Q86YW7 130 aa10.84□□□□□ -0.67
ATRIP-204ENST00000412052 MEGF9Q9H1U4 602 aa10.84□□□□□ -0.67
ATRIP-204ENST00000412052 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
ATRIP-204ENST00000412052 CFAP46Q8IYW2 2715 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 DOPEY2Q9Y3R5 2298 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 ATP5G2Q06055 141 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 RPL39LQ96EH5 51 aaKnown RBP10.83□□□□□ -0.68
ATRIP-204ENST00000412052 A0A1W2PPM0 123 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 SIVA1O15304 175 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 DPM2O94777 84 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 LY6EQ16553 131 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 SPCS1Q9Y6A9 102 aa10.83□□□□□ -0.68
ATRIP-204ENST00000412052 SORL1Q92673 2214 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 EDN2P20800 178 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 U3KQE9 123 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 TRAV41A0A0B4J266 112 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 RAB9AP51151 201 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 LAGE3Q14657 143 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 C9orf47Q6ZRZ4 202 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
ATRIP-204ENST00000412052 TRBV7-1A0A0A6YYK4 115 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 SRD5A1P18405 259 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 Q6ZS46 218 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 NHP2Q9NX24 153 aaKnown RBP10.81□□□□□ -0.68
ATRIP-204ENST00000412052 ARL3P36405 182 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 GTF2H5Q6ZYL4 71 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 C14orf178Q8N769 122 aaPredicted RBP10.81□□□□□ -0.68
ATRIP-204ENST00000412052 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
ATRIP-204ENST00000412052 COL25A1Q9BXS0 654 aaPredicted RBP10.81□□□□□ -0.68
ATRIP-204ENST00000412052 MUC4Q99102 2169 aa10.8□□□□□ -0.68
ATRIP-204ENST00000412052 RPL11P62913 178 aaKnown RBP10.8□□□□□ -0.68
ATRIP-204ENST00000412052 ZFAND2AQ8N6M9 145 aa10.8□□□□□ -0.68
ATRIP-204ENST00000412052 CUBNO60494 3623 aa10.8□□□□□ -0.68
ATRIP-204ENST00000412052 SMIM15Q7Z3B0 74 aa10.8□□□□□ -0.68
ATRIP-204ENST00000412052 ITLN2Q8WWU7 325 aaPredicted RBP10.8□□□□□ -0.68
ATRIP-204ENST00000412052 HIF1ANQ9NWT6 349 aa10.8□□□□□ -0.68
ATRIP-204ENST00000412052 KLK9Q2XQG4 91 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 SAMD5Q5TGI4 173 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 KLK9Q9UKQ9 250 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 CENPEQ02224 2701 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 CREBBPQ92793 2442 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 GNRH2O43555 120 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 RASL10AQ92737 203 aa10.79□□□□□ -0.68
ATRIP-204ENST00000412052 USP9YO00507 2555 aaPredicted RBP10.79□□□□□ -0.68
ATRIP-204ENST00000412052 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 SPOCK3Q9BQ16 436 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 POLQO75417 2590 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 PKD1L2Q7Z442 2459 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 K7ERU9 68 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 ATP5LO75964 103 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 IGHV4-39P01824 125 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 MGPP08493 103 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 IGHV4-38-2P0DP08 117 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
ATRIP-204ENST00000412052 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 C19orf54Q5BKX5 351 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
ATRIP-204ENST00000412052 SMIM2Q9BVW6 85 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 MOB4Q9Y3A3 225 aa10.78□□□□□ -0.68
ATRIP-204ENST00000412052 USP9XQ93008 2570 aaPredicted RBP10.77□□□□□ -0.68
ATRIP-204ENST00000412052 S100A4P26447 101 aaKnown RBP10.77□□□□□ -0.69
ATRIP-204ENST00000412052 A0A087WX48 190 aa10.77□□□□□ -0.69
ATRIP-204ENST00000412052 FABP2P12104 132 aa10.77□□□□□ -0.69
ATRIP-204ENST00000412052 BLCAPP62952 87 aa10.77□□□□□ -0.69
ATRIP-204ENST00000412052 MTURNQ8N3F0 131 aa10.77□□□□□ -0.69
ATRIP-204ENST00000412052 IGHV4-61A0A0C4DH41 118 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 CEND1Q8N111 149 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
ATRIP-204ENST00000412052 IGHV4-4A0A075B6R2 117 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 SOCS3O14543 225 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
ATRIP-204ENST00000412052 C9orf139Q6ZV77 190 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 JPT2Q9H910 190 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
ATRIP-204ENST00000412052 COTL1Q14019 142 aa10.75□□□□□ -0.69
ATRIP-204ENST00000412052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.75□□□□□ -0.69
ATRIP-204ENST00000412052 SUMO2P61956 95 aaKnown RBP10.75□□□□□ -0.69
ATRIP-204ENST00000412052 TMEM95Q3KNT9 176 aa10.75□□□□□ -0.69
ATRIP-204ENST00000412052 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
ATRIP-204ENST00000412052 PF4V1P10720 104 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 EMP1P54849 157 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 H3BUX3 64 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 AMTNQ6UX39 209 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 SMPXQ9UHP9 88 aa10.74□□□□□ -0.69
ATRIP-204ENST00000412052 PRSS47A8MTI9 375 aa10.73□□□□□ -0.69
ATRIP-204ENST00000412052 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
ATRIP-204ENST00000412052 G3V4G9 280 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms