RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 MUC4Q99102 2169 aa11.47□□□□□ -0.57
NOD1-202ENST00000411552 TRGV11A0A075B6L2 103 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 TRGV2A0A075B6R0 118 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 HOXA5P20719 270 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 RAB5CP51148 216 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 SMUG1Q53HV7 270 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 SAPCD1Q5SSQ6 148 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 Q86TA4 180 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 TCEAL7Q9BRU2 100 aa11.46□□□□□ -0.57
NOD1-202ENST00000411552 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.57
NOD1-202ENST00000411552 GNRH2O43555 120 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 P0DMU3 169 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 FAM231AP0DMU4 169 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 FAM231CP0DMU5 169 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 SULT1A2P50226 295 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 C15orf53Q8NAA6 179 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 C18orf15Q96N68 181 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
NOD1-202ENST00000411552 TRAV1-1A0A0B4J248 108 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 TYMSP04818 313 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 PFN1P07737 140 aaKnown RBP11.44□□□□□ -0.58
NOD1-202ENST00000411552 CCL20P78556 96 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 OR5I1Q13606 314 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 KCNS1Q96KK3 526 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
NOD1-202ENST00000411552 POM121L12Q8N7R1 296 aa11.43□□□□□ -0.58
NOD1-202ENST00000411552 FMC1Q96HJ9 113 aa11.43□□□□□ -0.58
NOD1-202ENST00000411552 SPXQ9BT56 116 aa11.43□□□□□ -0.58
NOD1-202ENST00000411552 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
NOD1-202ENST00000411552 NUDT3O95989 172 aa11.42□□□□□ -0.58
NOD1-202ENST00000411552 UBE2G1P62253 170 aa11.42□□□□□ -0.58
NOD1-202ENST00000411552 A0A0J9YY99 117 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 TRBV6-1A0A0K0K1D8 114 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 SCO2A0A1W2PP80 73 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 AKR1C3P42330 323 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
NOD1-202ENST00000411552 RASL10AQ92737 203 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 GNG13Q9P2W3 67 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
NOD1-202ENST00000411552 LTAP01374 205 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 IGHV3-53P01767 116 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 COX8CQ7Z4L0 72 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 UBE2DNLQ8IWF7 75 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 MANBALQ9NQG1 85 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 NACAE9PAV3 2078 aa11.4□□□□□ -0.58
NOD1-202ENST00000411552 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
NOD1-202ENST00000411552 TEX46H3BTG2 121 aa11.39□□□□□ -0.59
NOD1-202ENST00000411552 M0R2P5 195 aa11.39□□□□□ -0.59
NOD1-202ENST00000411552 CRIP1P50238 77 aa11.39□□□□□ -0.59
NOD1-202ENST00000411552 EPPK1P58107 5090 aaKnown RBP11.38□□□□□ -0.59
NOD1-202ENST00000411552 IGKV3D-20A0A0C4DH25 116 aa11.38□□□□□ -0.59
NOD1-202ENST00000411552 RNF212Q495C1 297 aa11.38□□□□□ -0.59
NOD1-202ENST00000411552 VSIG2Q96IQ7 327 aa11.38□□□□□ -0.59
NOD1-202ENST00000411552 BIRC6Q9NR09 4857 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 H3BNG1 76 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 SH2D1AO60880 128 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 S100A9P06702 114 aaKnown RBP11.37□□□□□ -0.59
NOD1-202ENST00000411552 SFTA3P0C7M3 94 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 FAM162BQ5T6X4 162 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 C9orf85Q96MD7 179 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 DNAH10Q8IVF4 4471 aa11.37□□□□□ -0.59
NOD1-202ENST00000411552 ORM1P02763 201 aa11.36□□□□□ -0.59
NOD1-202ENST00000411552 RNASE3P12724 160 aaKnown RBP11.36□□□□□ -0.59
NOD1-202ENST00000411552 FHL2Q14192 279 aa11.36□□□□□ -0.59
NOD1-202ENST00000411552 ZNF479Q96JC4 524 aa11.36□□□□□ -0.59
NOD1-202ENST00000411552 FRAS1Q86XX4 4008 aa11.35□□□□□ -0.59
NOD1-202ENST00000411552 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
NOD1-202ENST00000411552 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
NOD1-202ENST00000411552 TXNDC17Q9BRA2 123 aa11.35□□□□□ -0.59
NOD1-202ENST00000411552 TRAV4A0A0B4J268 109 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 B4DEV8 164 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 KRBOX1C9JBD0 128 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 C9JCJ5 164 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 M0R036 132 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 PAX4O43316 350 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 IFNA1P01562 189 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 RPL35P42766 123 aaKnown RBP11.34□□□□□ -0.59
NOD1-202ENST00000411552 CCL18P55774 89 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 BAGE2Q86Y30 109 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 DERL1Q9BUN8 251 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 HHLA3Q9XRX5 114 aa11.34□□□□□ -0.59
NOD1-202ENST00000411552 A0A096LPF7 62 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 TRGV4A0A0C4DH28 118 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 BCL2P10415 239 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 ASIPP42127 132 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 CRYBA4P53673 196 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
NOD1-202ENST00000411552 MEF2BQ02080 365 aaPredicted RBP11.33□□□□□ -0.6
NOD1-202ENST00000411552 SLAQ13239 276 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
NOD1-202ENST00000411552 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms