RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
TTC7A-204ENST00000409825 PSMG3-AS1Q96PY0 264 aa11.61□□□□□ -0.55
TTC7A-204ENST00000409825 TMEM243Q9BU79 118 aa11.61□□□□□ -0.55
TTC7A-204ENST00000409825 RASL10AQ92737 203 aa11.61□□□□□ -0.55
TTC7A-204ENST00000409825 POLR3KQ9Y2Y1 108 aaPredicted RBP11.61□□□□□ -0.55
TTC7A-204ENST00000409825 C5orf30Q96GV9 206 aa11.61□□□□□ -0.55
TTC7A-204ENST00000409825 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
TTC7A-204ENST00000409825 LY6LH3BQJ8 138 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 UBE2CO00762 179 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
TTC7A-204ENST00000409825 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
TTC7A-204ENST00000409825 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
TTC7A-204ENST00000409825 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
TTC7A-204ENST00000409825 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 ADMP35318 185 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 SORL1Q92673 2214 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 DNAL4O96015 105 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 AMN1Q8IY45 258 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 U3KQE9 123 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 LGALS9O00182 355 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 FAM231DQ6ZW35 169 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 FAM19A2Q8N3H0 131 aa11.6□□□□□ -0.55
TTC7A-204ENST00000409825 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
TTC7A-204ENST00000409825 COL4A2P08572 1712 aa11.59□□□□□ -0.55
TTC7A-204ENST00000409825 SERF1AO75920 110 aa11.59□□□□□ -0.55
TTC7A-204ENST00000409825 HLA-DMBP28068 263 aa11.59□□□□□ -0.55
TTC7A-204ENST00000409825 MRPL23Q16540 153 aaKnown RBP11.59□□□□□ -0.55
TTC7A-204ENST00000409825 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
TTC7A-204ENST00000409825 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
TTC7A-204ENST00000409825 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.55
TTC7A-204ENST00000409825 DEFB135Q30KP9 77 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 NIT1Q86X76 327 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
TTC7A-204ENST00000409825 C17orf77Q96MU5 243 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 I3L3M4 83 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 IGLV2-14P01704 120 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 PRR31Q5SQ13 230 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
TTC7A-204ENST00000409825 CBY1Q9Y3M2 126 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 ZNF561-AS1K7EIQ3 104 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 NDUFA7O95182 113 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 PROP1O75360 226 aa11.57□□□□□ -0.56
TTC7A-204ENST00000409825 TRBV7-9A0A0J9YWB2 115 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 A0A1W2PPR1 153 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 PLNP26678 52 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 LINC00158P58513 81 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
TTC7A-204ENST00000409825 DOPEY1Q5JWR5 2465 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 E7EUB6 86 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 ICOSQ9Y6W8 199 aa11.56□□□□□ -0.56
TTC7A-204ENST00000409825 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 TRBV12-3P01733 135 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 UNQ9165/PRO28630Q6UXU0 137 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 ATOH7Q8N100 152 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 PLEKHB2Q96CS7 222 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 DMRT1Q9Y5R6 373 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 FLNBO75369 2602 aaKnown RBP11.55□□□□□ -0.56
TTC7A-204ENST00000409825 A0A0J9YY99 117 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 SLC25A20O43772 301 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 ZNF702PQ9H963 129 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 FAM104BQ5XKR9 115 aa11.55□□□□□ -0.56
TTC7A-204ENST00000409825 SMR3AQ99954 134 aa11.54□□□□□ -0.56
TTC7A-204ENST00000409825 ZNF25P17030 456 aaPredicted RBP11.54□□□□□ -0.56
TTC7A-204ENST00000409825 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
TTC7A-204ENST00000409825 TMEM213A2RRL7 107 aa11.54□□□□□ -0.56
TTC7A-204ENST00000409825 CIDEAO60543 219 aa11.53□□□□□ -0.56
TTC7A-204ENST00000409825 IGKCP01834 107 aa11.53□□□□□ -0.56
TTC7A-204ENST00000409825 SPATA25Q9BR10 227 aa11.53□□□□□ -0.56
TTC7A-204ENST00000409825 PATE2Q6UY27 113 aa11.53□□□□□ -0.56
TTC7A-204ENST00000409825 FN1P02751 2386 aaKnown RBP11.53□□□□□ -0.56
TTC7A-204ENST00000409825 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.56
TTC7A-204ENST00000409825 IGLL1P15814 213 aa11.52□□□□□ -0.56
TTC7A-204ENST00000409825 LTAP01374 205 aa11.52□□□□□ -0.56
TTC7A-204ENST00000409825 GAGE6Q13070 117 aa11.52□□□□□ -0.56
TTC7A-204ENST00000409825 DEFB114Q30KQ6 69 aa11.52□□□□□ -0.56
TTC7A-204ENST00000409825 ANGP03950 147 aaKnown RBP11.52□□□□□ -0.57
TTC7A-204ENST00000409825 LBHQ53QV2 105 aaPredicted RBP11.52□□□□□ -0.57
TTC7A-204ENST00000409825 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
TTC7A-204ENST00000409825 SMKR1H3BMG3 65 aa11.52□□□□□ -0.57
TTC7A-204ENST00000409825 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
TTC7A-204ENST00000409825 CRIP3Q6Q6R5 217 aa11.52□□□□□ -0.57
TTC7A-204ENST00000409825 CYYR1Q96J86 154 aa11.52□□□□□ -0.57
TTC7A-204ENST00000409825 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.57
TTC7A-204ENST00000409825 SPRY2O43597 315 aa11.51□□□□□ -0.57
TTC7A-204ENST00000409825 DEFB104AQ8WTQ1 72 aa11.51□□□□□ -0.57
TTC7A-204ENST00000409825 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
TTC7A-204ENST00000409825 A0A087X0K7 114 aa11.51□□□□□ -0.57
TTC7A-204ENST00000409825 A0A096LPF7 62 aa11.51□□□□□ -0.57
TTC7A-204ENST00000409825 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms