RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 GAGE12GP0CL81 117 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 GAGE12IP0CL82 117 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 LGALS9BQ3B8N2 356 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 LGALS9CQ6DKI2 356 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 Q6ZQT7 251 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 TMEM183AQ8IXX5 376 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 C15orf53Q8NAA6 179 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 SPXQ9BT56 116 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 TP53TG3Q9ULZ0 132 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 TRBV6-1A0A0K0K1D8 114 aa7.71□□□□□ -1.18
CHMP3-205ENST00000409810 SPINK4O60575 86 aa7.71□□□□□ -1.18
CHMP3-205ENST00000409810 TAGLN2P37802 199 aaKnown RBP7.71□□□□□ -1.18
CHMP3-205ENST00000409810 Q6ZTI0 123 aa7.71□□□□□ -1.18
CHMP3-205ENST00000409810 LINC00479Q96M42 142 aa7.71□□□□□ -1.18
CHMP3-205ENST00000409810 C18orf15Q96N68 181 aa7.71□□□□□ -1.18
CHMP3-205ENST00000409810 SCO2A0A1W2PP80 73 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 TYMSP04818 313 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 P0DMU3 169 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 FAM231AP0DMU4 169 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 FAM231CP0DMU5 169 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 ZNF80P51504 273 aaPredicted RBP7.7□□□□□ -1.18
CHMP3-205ENST00000409810 NKX2-5P52952 324 aaPredicted RBP7.7□□□□□ -1.18
CHMP3-205ENST00000409810 BLOC1S1P78537 153 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 TMEM88Q6PEY1 159 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 ALKAL2Q6UX46 152 aa7.7□□□□□ -1.18
CHMP3-205ENST00000409810 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 FABP5P3A8MUU1 101 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 LTAP01374 205 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 OR5I1Q13606 314 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 MDFICQ9P1T7 246 aa7.69□□□□□ -1.18
CHMP3-205ENST00000409810 NACAE9PAV3 2078 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 M0R2P5 195 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 GNRH2O43555 120 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 PDE6DO43924 150 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 BCL2P10415 239 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 CCL20P78556 96 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 FAM162BQ5T6X4 162 aa7.68□□□□□ -1.18
CHMP3-205ENST00000409810 MRPL16Q9NX20 251 aaKnown RBP7.68□□□□□ -1.18
CHMP3-205ENST00000409810 S100A4P26447 101 aaKnown RBP7.67□□□□□ -1.18
CHMP3-205ENST00000409810 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
CHMP3-205ENST00000409810 BAGE2Q86Y30 109 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 UBE2DNLQ8IWF7 75 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 RASL10AQ92737 203 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 C11orf52Q96A22 123 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 ZC2HC1AQ96GY0 325 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 KMT2AQ03164 3969 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 DNAH6Q9C0G6 4158 aa7.67□□□□□ -1.18
CHMP3-205ENST00000409810 TRAV26-1A0A087WT03 109 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 H3BNG1 76 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 SH2D1AO60880 128 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 NUDT3O95989 172 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 ORM1P02763 201 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 ASIPP42127 132 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 RPL35P42766 123 aaKnown RBP7.66□□□□□ -1.18
CHMP3-205ENST00000409810 SLAQ13239 276 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 ZNF674Q2M3X9 581 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 C11orf21Q9P2W6 132 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 BOLA1Q9Y3E2 137 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 RYR3Q15413 4870 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 RYR2Q92736 4967 aa7.66□□□□□ -1.18
CHMP3-205ENST00000409810 TRAV4A0A0B4J268 109 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 B4DEV8 164 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 HOXA5P20719 270 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 VPS13DQ5THJ4 4388 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 POM121L12Q8N7R1 296 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 NHLRC2Q8NBF2 726 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 C9orf85Q96MD7 179 aa7.65□□□□□ -1.18
CHMP3-205ENST00000409810 IGKV3D-20A0A0C4DH25 116 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 TRGV4A0A0C4DH28 118 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 A0A0J9YY99 117 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 IGHV3-53P01767 116 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 RNF212Q495C1 297 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 OR4C5Q8NGB2 326 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 LYPD6BQ8NI32 183 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 MED9Q9NWA0 146 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 PRO0255Q9UI72 69 aa7.64□□□□□ -1.19
CHMP3-205ENST00000409810 KRBOX1C9JBD0 128 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 C9JCJ5 164 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 M0R036 132 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 CIDEAO60543 219 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 RNASE3P12724 160 aaKnown RBP7.63□□□□□ -1.19
CHMP3-205ENST00000409810 GNG4P50150 75 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 CRIP1P50238 77 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 CCL18P55774 89 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 FAM3BP58499 235 aaPredicted RBP7.63□□□□□ -1.19
CHMP3-205ENST00000409810 ZNF876PQ49A33 203 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 DNLZQ5SXM8 178 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 PTH2Q96A98 100 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 MLST8Q9BVC4 326 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 BIN3Q9NQY0 253 aa7.63□□□□□ -1.19
CHMP3-205ENST00000409810 IL36BQ9NZH7 164 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms