RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 Q86TA4 180 aa21.9■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TCEAL7Q9BRU2 100 aa21.9■■□□□ 1.1
TRAF3IP1-203ENST00000409739 GCGP01275 180 aa21.89■■□□□ 1.09
TRAF3IP1-203ENST00000409739 SMUG1Q53HV7 270 aa21.89■■□□□ 1.09
TRAF3IP1-203ENST00000409739 SAPCD1Q5SSQ6 148 aa21.89■■□□□ 1.09
TRAF3IP1-203ENST00000409739 SULT1A2P50226 295 aa21.88■■□□□ 1.09
TRAF3IP1-203ENST00000409739 C18orf15Q96N68 181 aa21.88■■□□□ 1.09
TRAF3IP1-203ENST00000409739 C15orf53Q8NAA6 179 aa21.87■■□□□ 1.09
TRAF3IP1-203ENST00000409739 MRPL16Q9NX20 251 aaKnown RBP21.87■■□□□ 1.09
TRAF3IP1-203ENST00000409739 NACAE9PAV3 2078 aa21.87■■□□□ 1.09
TRAF3IP1-203ENST00000409739 TRGV2A0A075B6R0 118 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 TYMSP04818 313 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 PFN1P07737 140 aaKnown RBP21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 P0DMU3 169 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 FAM231AP0DMU4 169 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 FAM231CP0DMU5 169 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 HOXA5P20719 270 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 LGALS9BQ3B8N2 356 aa21.86■■□□□ 1.09
TRAF3IP1-203ENST00000409739 GNRH2O43555 120 aa21.85■■□□□ 1.09
TRAF3IP1-203ENST00000409739 SDF2L1Q9HCN8 221 aa21.85■■□□□ 1.09
TRAF3IP1-203ENST00000409739 C11orf21Q9P2W6 132 aa21.85■■□□□ 1.09
TRAF3IP1-203ENST00000409739 FMC1Q96HJ9 113 aa21.84■■□□□ 1.09
TRAF3IP1-203ENST00000409739 KCNS1Q96KK3 526 aa21.84■■□□□ 1.09
TRAF3IP1-203ENST00000409739 DNAH6Q9C0G6 4158 aa21.84■■□□□ 1.09
TRAF3IP1-203ENST00000409739 TRAV1-1A0A0B4J248 108 aa21.83■■□□□ 1.09
TRAF3IP1-203ENST00000409739 IGHV3-16A0A0C4DH30 117 aa21.83■■□□□ 1.09
TRAF3IP1-203ENST00000409739 OR5I1Q13606 314 aa21.83■■□□□ 1.09
TRAF3IP1-203ENST00000409739 UBE2G1P62253 170 aa21.82■■□□□ 1.08
TRAF3IP1-203ENST00000409739 CCL20P78556 96 aa21.82■■□□□ 1.08
TRAF3IP1-203ENST00000409739 SPXQ9BT56 116 aa21.82■■□□□ 1.08
TRAF3IP1-203ENST00000409739 AKR1C3P42330 323 aa21.81■■□□□ 1.08
TRAF3IP1-203ENST00000409739 TRAV26-1A0A087WT03 109 aa21.8■■□□□ 1.08
TRAF3IP1-203ENST00000409739 POM121L12Q8N7R1 296 aa21.8■■□□□ 1.08
TRAF3IP1-203ENST00000409739 MANBALQ9NQG1 85 aa21.8■■□□□ 1.08
TRAF3IP1-203ENST00000409739 TRBV6-1A0A0K0K1D8 114 aa21.79■■□□□ 1.08
TRAF3IP1-203ENST00000409739 SCO2A0A1W2PP80 73 aa21.79■■□□□ 1.08
TRAF3IP1-203ENST00000409739 NUDT3O95989 172 aa21.79■■□□□ 1.08
TRAF3IP1-203ENST00000409739 GNG13Q9P2W3 67 aa21.79■■□□□ 1.08
TRAF3IP1-203ENST00000409739 ZFP30Q9Y2G7 519 aa21.79■■□□□ 1.08
TRAF3IP1-203ENST00000409739 NKX2-5P52952 324 aaPredicted RBP21.78■■□□□ 1.08
TRAF3IP1-203ENST00000409739 ZC2HC1AQ96GY0 325 aa21.78■■□□□ 1.08
TRAF3IP1-203ENST00000409739 TEX46H3BTG2 121 aa21.77■■□□□ 1.08
TRAF3IP1-203ENST00000409739 LTAP01374 205 aa21.77■■□□□ 1.08
TRAF3IP1-203ENST00000409739 COX8CQ7Z4L0 72 aa21.77■■□□□ 1.08
TRAF3IP1-203ENST00000409739 RASL10AQ92737 203 aa21.77■■□□□ 1.08
TRAF3IP1-203ENST00000409739 A0A0J9YY99 117 aa21.76■■□□□ 1.07
TRAF3IP1-203ENST00000409739 IGHV3-53P01767 116 aa21.76■■□□□ 1.07
TRAF3IP1-203ENST00000409739 UBE2DNLQ8IWF7 75 aa21.76■■□□□ 1.07
TRAF3IP1-203ENST00000409739 M0R2P5 195 aa21.75■■□□□ 1.07
TRAF3IP1-203ENST00000409739 FABP5P3A8MUU1 101 aa21.74■■□□□ 1.07
TRAF3IP1-203ENST00000409739 CRIP1P50238 77 aa21.73■■□□□ 1.07
TRAF3IP1-203ENST00000409739 RNF212Q495C1 297 aa21.73■■□□□ 1.07
TRAF3IP1-203ENST00000409739 IGKV3D-20A0A0C4DH25 116 aa21.72■■□□□ 1.07
TRAF3IP1-203ENST00000409739 H3BNG1 76 aa21.72■■□□□ 1.07
TRAF3IP1-203ENST00000409739 ALKAL2Q6UX46 152 aa21.72■■□□□ 1.07
TRAF3IP1-203ENST00000409739 VSIG2Q96IQ7 327 aa21.72■■□□□ 1.07
TRAF3IP1-203ENST00000409739 SH2D1AO60880 128 aa21.71■■□□□ 1.07
TRAF3IP1-203ENST00000409739 S100A9P06702 114 aaKnown RBP21.71■■□□□ 1.07
TRAF3IP1-203ENST00000409739 C9orf85Q96MD7 179 aa21.71■■□□□ 1.07
TRAF3IP1-203ENST00000409739 FAM162BQ5T6X4 162 aa21.7■■□□□ 1.06
TRAF3IP1-203ENST00000409739 NHLRC2Q8NBF2 726 aa21.7■■□□□ 1.06
TRAF3IP1-203ENST00000409739 BOLA1Q9Y3E2 137 aa21.7■■□□□ 1.06
TRAF3IP1-203ENST00000409739 SFTA3P0C7M3 94 aa21.69■■□□□ 1.06
TRAF3IP1-203ENST00000409739 RNASE3P12724 160 aaKnown RBP21.69■■□□□ 1.06
TRAF3IP1-203ENST00000409739 ZNF674Q2M3X9 581 aa21.69■■□□□ 1.06
TRAF3IP1-203ENST00000409739 C11orf52Q96A22 123 aa21.69■■□□□ 1.06
TRAF3IP1-203ENST00000409739 FHL2Q14192 279 aa21.68■■□□□ 1.06
TRAF3IP1-203ENST00000409739 ZNF479Q96JC4 524 aa21.68■■□□□ 1.06
TRAF3IP1-203ENST00000409739 TXNDC17Q9BRA2 123 aa21.68■■□□□ 1.06
TRAF3IP1-203ENST00000409739 TRAV4A0A0B4J268 109 aa21.67■■□□□ 1.06
TRAF3IP1-203ENST00000409739 ORM1P02763 201 aa21.67■■□□□ 1.06
TRAF3IP1-203ENST00000409739 B4DEV8 164 aa21.66■■□□□ 1.06
TRAF3IP1-203ENST00000409739 IFNA1P01562 189 aa21.66■■□□□ 1.06
TRAF3IP1-203ENST00000409739 PRO0255Q9UI72 69 aa21.66■■□□□ 1.06
TRAF3IP1-203ENST00000409739 KRBOX1C9JBD0 128 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 M0R036 132 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 BCL2P10415 239 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 RPL35P42766 123 aaKnown RBP21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 MEF2BQ02080 365 aaPredicted RBP21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 BAGE2Q86Y30 109 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 DERL1Q9BUN8 251 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 MLST8Q9BVC4 326 aa21.65■■□□□ 1.06
TRAF3IP1-203ENST00000409739 TRGV4A0A0C4DH28 118 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 C9JCJ5 164 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 PAX4O43316 350 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 ASIPP42127 132 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 CRYBA4P53673 196 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 CCL18P55774 89 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 ZNF876PQ49A33 203 aa21.64■■□□□ 1.05
TRAF3IP1-203ENST00000409739 A0A096LPF7 62 aa21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 FAM3BP58499 235 aaPredicted RBP21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 SLAQ13239 276 aa21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 OR4C5Q8NGB2 326 aa21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 HHLA3Q9XRX5 114 aa21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 LINC00588Q9Y4M8 146 aa21.63■■□□□ 1.05
TRAF3IP1-203ENST00000409739 S100A4P26447 101 aaKnown RBP21.62■■□□□ 1.05
TRAF3IP1-203ENST00000409739 LINC01559Q495D7 138 aa21.62■■□□□ 1.05
TRAF3IP1-203ENST00000409739 ZNF506Q5JVG8 444 aa21.62■■□□□ 1.05
TRAF3IP1-203ENST00000409739 PGPEP1LA6NFU8 196 aa21.61■■□□□ 1.05
TRAF3IP1-203ENST00000409739 DNLZQ5SXM8 178 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms