RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 BEAN1Q3B7T3 259 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 Q6AWC8 147 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 STHQ8IWL8 128 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 FER1L6-AS1Q8NA97 138 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 ARMS2P0C7Q2 107 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 ANXA2RQ3ZCQ2 193 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 SHISA2Q6UWI4 295 aa9.19□□□□□ -0.94
CHMP3-204ENST00000409727 INSL3P51460 131 aa9.18□□□□□ -0.94
CHMP3-204ENST00000409727 RAB5BP61020 215 aa9.18□□□□□ -0.94
CHMP3-204ENST00000409727 VWFP04275 2813 aa9.18□□□□□ -0.94
CHMP3-204ENST00000409727 A0A1B0GUT8 65 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 GNRH2O43555 120 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-204ENST00000409727 BORCS7Q96B45 105 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-204ENST00000409727 MRPL18Q9H0U6 180 aaKnown RBP9.17□□□□□ -0.94
CHMP3-204ENST00000409727 H3BVH4 76 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 SPRY2O43597 315 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-204ENST00000409727 HTN1P15515 57 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 CMC4P56277 68 aaPredicted RBP9.17□□□□□ -0.94
CHMP3-204ENST00000409727 HBBP68871 147 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 C19orf73Q9NVV2 129 aa9.17□□□□□ -0.94
CHMP3-204ENST00000409727 NOTCH3Q9UM47 2321 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 CRXO43186 299 aaPredicted RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1A1P0DJD3 496 aaKnown RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1CP0DJD4 496 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 RBMY1FQ15415 496 aaKnown RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 ATP5L2Q7Z4Y8 100 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 GTSCR1Q86UQ5 136 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 DEFB125Q8N687 156 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
CHMP3-204ENST00000409727 GNB1LQ9BYB4 327 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
CHMP3-204ENST00000409727 A8MTW9 85 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 TRGC1P0CF51 173 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 RIGQ13278 110 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 TWIST1Q15672 202 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 TRPT1Q86TN4 253 aaKnown RBP9.15□□□□□ -0.94
CHMP3-204ENST00000409727 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
CHMP3-204ENST00000409727 PHOX2AO14813 284 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BKO60814 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BJP06899 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BOP23527 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BBP33778 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 CTRLP40313 264 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 ASIPP42127 132 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BDP58876 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BCP62807 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.95
CHMP3-204ENST00000409727 OR10AG1Q8NH19 301 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.95
CHMP3-204ENST00000409727 PRM2P04554 102 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 NTF3P20783 257 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 SLAQ13239 276 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 TRRAPQ9Y4A5 3859 aa9.14□□□□□ -0.95
CHMP3-204ENST00000409727 STAB1Q9NY15 2570 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 HLA-DQA1P01909 254 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 APCSP02743 223 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 OXLD1Q5BKU9 147 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 FAM110AQ9BQ89 295 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 IGHV3OR16-12A0A075B7B8 117 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 CBY3A6NI87 242 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 F2Z2F3 143 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 INSP01308 110 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 MT-ND6P03923 174 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 NUTF2P61970 127 aaKnown RBP9.13□□□□□ -0.95
CHMP3-204ENST00000409727 COX19Q49B96 90 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 Q8N1Y9 231 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
CHMP3-204ENST00000409727 M0R381 172 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 S100A6P06703 90 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 RNASE3P12724 160 aaKnown RBP9.12□□□□□ -0.95
CHMP3-204ENST00000409727 NDUFA6P56556 154 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 LINC01587Q99440 93 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
CHMP3-204ENST00000409727 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
CHMP3-204ENST00000409727 TMEM208Q9BTX3 173 aa9.11□□□□□ -0.95
CHMP3-204ENST00000409727 MDFICQ9P1T7 246 aa9.11□□□□□ -0.95
CHMP3-204ENST00000409727 OR5AL1P0C617 328 aa9.11□□□□□ -0.95
CHMP3-204ENST00000409727 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms