RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 OR5I1Q13606 314 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 ADIRFQ15847 76 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 TDRG1Q3Y452 100 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 CBY3A6NI87 242 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 KRBOX1C9JBD0 128 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 P01737 135 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 MIFP14174 115 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 MUC21Q5SSG8 566 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 Q6ZQT7 251 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 SLC7A5P1Q8MH63 180 aa11.94□□□□□ -0.5
TSPAN4-208ENST00000409531 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 C19orf71A6NCJ1 209 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 B4DEV8 164 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 ADCYAP1P18509 176 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 ZNF493Q6ZR52 646 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 ISOC2Q96AB3 205 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 C16orf74Q96GX8 76 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 X6R8D5 127 aa11.93□□□□□ -0.5
TSPAN4-208ENST00000409531 XKRY2A2RUG3 117 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 C3orf84H3BNL1 204 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 C10orf91Q5T1B1 145 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 C15orf54Q8N8G6 183 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 C11orf21Q9P2W6 132 aa11.92□□□□□ -0.5
TSPAN4-208ENST00000409531 TMEM189A5PLL7 270 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 M0R036 132 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 RNASE7Q9H1E1 156 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 OSTCQ9NRP0 149 aa11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 CARHSP1Q9Y2V2 147 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-208ENST00000409531 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
TSPAN4-208ENST00000409531 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-208ENST00000409531 CXCL1P09341 107 aa11.9□□□□□ -0.5
TSPAN4-208ENST00000409531 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
TSPAN4-208ENST00000409531 RPP21Q9H633 154 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-208ENST00000409531 TYMSP04818 313 aa11.89□□□□□ -0.51
TSPAN4-208ENST00000409531 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-208ENST00000409531 ASIPP42127 132 aa11.89□□□□□ -0.51
TSPAN4-208ENST00000409531 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
TSPAN4-208ENST00000409531 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-208ENST00000409531 TMSB15BA0A087X1C1 80 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 AZU1P20160 251 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 CT83Q5H943 113 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 DNLZQ5SXM8 178 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 Q8NAQ8 132 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
TSPAN4-208ENST00000409531 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 IGHV4-28A0A0C4DH34 117 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 GNRH2O43555 120 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 PRM2P04554 102 aa11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 C11orf68Q9H3H3 251 aaKnown RBP11.87□□□□□ -0.51
TSPAN4-208ENST00000409531 A8MWL6 223 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 APOC3P02656 99 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 TCL1AP56279 114 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 SVBPQ8N300 66 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 SPXQ9BT56 116 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 TIMM8BQ9Y5J9 83 aaPredicted RBP11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 GRIFINA4D1Z8 144 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 CASC10Q5T4H9 136 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 ANAPC16Q96DE5 110 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 GSN-AS1Q9NRJ2 163 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 IL36BQ9NZH7 164 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 MDFICQ9P1T7 246 aa11.86□□□□□ -0.51
TSPAN4-208ENST00000409531 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
TSPAN4-208ENST00000409531 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
TSPAN4-208ENST00000409531 SNAPINO95295 136 aa11.85□□□□□ -0.51
TSPAN4-208ENST00000409531 RNF212Q495C1 297 aa11.85□□□□□ -0.51
TSPAN4-208ENST00000409531 V9GYV3 84 aa11.85□□□□□ -0.51
TSPAN4-208ENST00000409531 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 FAM231BA6NCW3 169 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 H3BVH4 76 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 EMP1P54849 157 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 RHEBQ15382 184 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 CLRN3Q8NCR9 226 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 C9orf85Q96MD7 179 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
TSPAN4-208ENST00000409531 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms