RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 UBE2E2Q96LR5 201 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 GFRA4Q9GZZ7 299 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 MRPL16Q9NX20 251 aaKnown RBP3.01□□□□□ -1.93
RGPD4-201ENST00000408999 CRPP02741 224 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 DEFB113Q30KQ7 82 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 Q6ZSR3 168 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 THAP8Q8NA92 274 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 DPH3P1Q9H4G8 78 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 CCDC168Q8NDH2 2452 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
RGPD4-201ENST00000408999 TRBV19A0A075B6N1 114 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 TRBV24-1A0A075B6N3 115 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 ADARB2-AS1A8MUL3 147 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 COTL1Q14019 142 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 OR9G4Q8NGQ1 327 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 A0A087WWL8 130 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 SMKR1H3BMG3 65 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 NDUFA4O00483 81 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 RIPPLY3P57055 190 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 DEFB131AP59861 70 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 SHISA2Q6UWI4 295 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 C8orf86Q6ZUL3 223 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 RITA1Q96K30 269 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 PRORYQ9H606 182 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 KLK9Q9UKQ9 250 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV4-30-2A0A087WSY4 118 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 WISP2O76076 250 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 DEFB112Q30KQ8 113 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 HIST3H2BBQ8N257 126 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 C14orf178Q8N769 122 aaPredicted RBP3□□□□□ -1.93
RGPD4-201ENST00000408999 C11orf68Q9H3H3 251 aaKnown RBP3□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV4-39P01824 125 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV4-38-2P0DP08 117 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 DEFB121Q5J5C9 76 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 DTX2Q86UW9 622 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 Q8NA96 180 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 OR11H6Q8NGC7 330 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 NRGNQ92686 78 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 HIST1H2BLQ99880 126 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 CSTL1Q9H114 145 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 TMEM14CQ9P0S9 112 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 ZNF492Q9P255 531 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 LSM4Q9Y4Z0 139 aaKnown RBP3□□□□□ -1.93
RGPD4-201ENST00000408999 MTORP42345 2549 aa3□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV4-61A0A0C4DH41 118 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 LINC01549A6NIU2 74 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV4-59P01825 116 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 PFN1P07737 140 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 UBE2DNLQ8IWF7 75 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 C3orf56Q8N813 242 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 ZNF114Q8NC26 417 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 CSPG4Q6UVK1 2322 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 TRAV9-2A0A087WT02 112 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 LINC01559Q495D7 138 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 NPBQ8NG41 125 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 VPREB3Q9UKI3 123 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 COL27A1Q8IZC6 1860 aaPredicted RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 KNCNA6PVL3 124 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 GGTLC3B5MD39 225 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 H3BUA1 57 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 AMBPP02760 352 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 CTRLP40313 264 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 C1orf194Q5T5A4 169 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 AMN1Q8IY45 258 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 IFI27L1Q96BM0 104 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 C1QTNF4Q9BXJ3 329 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 C11orf1Q9H5F2 150 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 IGHV7-4-1A0A0J9YVY3 117 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 TMEM213A2RRL7 107 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 PLP1P60201 277 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 SPINK13Q1W4C9 94 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 FXYD5Q96DB9 178 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 CENPVL3A0A0U1RRI6 287 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 IGLC7A0M8Q6 106 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 RBMY1BA6NDE4 496 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 RBMY1EA6NEQ0 496 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 ZNF815PA8K554 130 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 PRSS46E5RG02 174 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 RBMY1DP0C7P1 496 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 RBMY1A1P0DJD3 496 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 RBMY1CP0DJD4 496 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 CFHR3Q02985 330 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 TMEM95Q3KNT9 176 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 ZNF876PQ49A33 203 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 VGLL1Q99990 258 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
RGPD4-201ENST00000408999 FN1P02751 2386 aaKnown RBP2.99□□□□□ -1.93
RGPD4-201ENST00000408999 TRAV12-2A0A075B6T6 113 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 TRAV2A0A0B4J234 112 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 ARMS2P0C7Q2 107 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 IGLC1P0CG04 106 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 RPL36AP83881 106 aaKnown RBP2.98□□□□□ -1.93
RGPD4-201ENST00000408999 KIR3DS1Q14943 382 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 CD300EQ496F6 205 aaPredicted RBP2.98□□□□□ -1.93
RGPD4-201ENST00000408999 STPG4Q8N801 248 aa2.98□□□□□ -1.93
RGPD4-201ENST00000408999 OR2K2Q8NGT1 345 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms