RNA–Protein interactions for RNA: ENST00000408031.1

GRAMD4-203, Transcript of GRAM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene GRAMD4, Length 2,834 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-203ENST00000408031 WIPF1O43516 503 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 NDUFA3O95167 84 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 NPBQ8NG41 125 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 FOXC2Q99958 501 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 MAP1LC3AQ9H492 121 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 ITPR1Q14643 2758 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 CSDC2Q9Y534 153 aaKnown RBP12.19□□□□□ -0.46
GRAMD4-203ENST00000408031 IGHV7-81A0A0B4J1V7 117 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 FABP5P3A8MUU1 101 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 DEFB1P60022 68 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 MT-ATP8P03928 68 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 PRTN3P24158 256 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 TMEM158Q8WZ71 300 aa12.18□□□□□ -0.46
GRAMD4-203ENST00000408031 RNF185Q96GF1 192 aa12.17□□□□□ -0.46
GRAMD4-203ENST00000408031 HIVEP3Q5T1R4 2406 aa12.17□□□□□ -0.46
GRAMD4-203ENST00000408031 U3KQK5 164 aa12.17□□□□□ -0.46
GRAMD4-203ENST00000408031 ATP6V0E1O15342 81 aa12.16□□□□□ -0.46
GRAMD4-203ENST00000408031 DTX2Q86UW9 622 aa12.16□□□□□ -0.46
GRAMD4-203ENST00000408031 TMEM219Q86XT9 240 aa12.16□□□□□ -0.46
GRAMD4-203ENST00000408031 C11orf21Q9P2W6 132 aa12.16□□□□□ -0.46
GRAMD4-203ENST00000408031 FCER1GP30273 86 aa12.16□□□□□ -0.46
GRAMD4-203ENST00000408031 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.467e-7■■■■□ 25.6
GRAMD4-203ENST00000408031 WFDC2Q14508 124 aa12.15□□□□□ -0.46
GRAMD4-203ENST00000408031 FBXL19-AS1Q494R0 122 aa12.15□□□□□ -0.46
GRAMD4-203ENST00000408031 IGLC6P0CF74 106 aa12.15□□□□□ -0.46
GRAMD4-203ENST00000408031 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
GRAMD4-203ENST00000408031 CUBNO60494 3623 aa12.15□□□□□ -0.47
GRAMD4-203ENST00000408031 TRAV40A0A0B4J280 105 aa12.15□□□□□ -0.47
GRAMD4-203ENST00000408031 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.47
GRAMD4-203ENST00000408031 AGPAT4-IT1Q9H0P7 198 aa12.15□□□□□ -0.47
GRAMD4-203ENST00000408031 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE7O76087 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 IGF1P05019 195 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 EFNA4P52798 201 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 FXYD2P54710 66 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 GAGE4Q13068 117 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 ZC2HC1BQ5TFG8 222 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 TM2D2Q9BX73 214 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 ODF3BA8MYP8 253 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 ETDBQ3ZM63 59 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 Q8N9W7 124 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 C20orf78Q9BR46 151 aa12.14□□□□□ -0.47
GRAMD4-203ENST00000408031 F8W1H4 67 aa12.13□□□□□ -0.47
GRAMD4-203ENST00000408031 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
GRAMD4-203ENST00000408031 PAX8Q06710 450 aa12.13□□□□□ -0.47
GRAMD4-203ENST00000408031 SPANXN1Q5VSR9 72 aa12.13□□□□□ -0.47
GRAMD4-203ENST00000408031 CDIP1Q9H305 208 aa12.13□□□□□ -0.47
GRAMD4-203ENST00000408031 BUB3O43684 328 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 Q6ZUT4 128 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 NHP2Q9NX24 153 aaKnown RBP12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 A0A1W2PPR1 153 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 H3BVH4 76 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 INSL3P51460 131 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 NRGNQ92686 78 aa12.12□□□□□ -0.47
GRAMD4-203ENST00000408031 M0R381 172 aa12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 NHLRC4P0CG21 123 aaPredicted RBP12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 TMEM78Q5T7P6 136 aa12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 UBTD1Q9HAC8 227 aa12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 MRPL35Q9NZE8 188 aaKnown RBP12.11□□□□□ -0.47
GRAMD4-203ENST00000408031 CCDC179H3BU77 68 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 M0R1W7 72 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 IGKCP01834 107 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 SAA4P35542 130 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 XGP55808 180 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
GRAMD4-203ENST00000408031 SMIM13P0DJ93 91 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 C16orf92Q96LL3 132 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 CHAC1Q9BUX1 264 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 AGRNO00468 2067 aa12.09□□□□□ -0.47
GRAMD4-203ENST00000408031 MAPKAPK5-AS1Q8N8E1 139 aa12.08□□□□□ -0.48
GRAMD4-203ENST00000408031 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
GRAMD4-203ENST00000408031 PKD1L2Q7Z442 2459 aa12.08□□□□□ -0.48
GRAMD4-203ENST00000408031 TRBV25-1A0A075B6N4 114 aa12.08□□□□□ -0.48
GRAMD4-203ENST00000408031 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
GRAMD4-203ENST00000408031 CLPSL1A2RUU4 121 aa12.07□□□□□ -0.48
GRAMD4-203ENST00000408031 IGHV3-11P01762 117 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms