RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 ATG2AQ2TAZ0 1938 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1A1P0DJD3 496 aaKnown RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1CP0DJD4 496 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 IGHV1-2P23083 117 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 RBMY1FQ15415 496 aaKnown RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 ZMAT4Q9H898 229 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 EP300Q09472 2414 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-205ENST00000406768 B9A039 149 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 H3BRN7 92 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 P0DMU3 169 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 FAM231AP0DMU4 169 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 FAM231CP0DMU5 169 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
PSEN1-205ENST00000406768 IGHV3-49A0A0A0MS15 119 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 TRAV21A0A0B4J279 112 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 C17orf58Q2M2W7 97 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 Q6ZT83 130 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 RASL10AQ92737 203 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 MRPL36Q9P0J6 103 aaKnown RBP7.08□□□□□ -1.28
PSEN1-205ENST00000406768 NDUFC2O95298 119 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 CLEC2BQ92478 149 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 BRI3O95415 125 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 CRYGBP07316 175 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
PSEN1-205ENST00000406768 FHL3Q13643 280 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 DOPEY2Q9Y3R5 2298 aa7.08□□□□□ -1.28
PSEN1-205ENST00000406768 IGKV3D-7A0A0C4DH55 119 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CD28P10747 220 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CNTFRP26992 372 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 UCNP55089 124 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 BRK1Q8WUW1 75 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CHD8Q9HCK8 2581 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 IGKV1D-37A0A075B6S9 117 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 TRAV17A0A0B4J275 112 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 NTN3O00634 580 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CXCL12P48061 93 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
PSEN1-205ENST00000406768 EEF1AKMT3Q96AZ1 226 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CACNA1BQ00975 2339 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 FAM240AA0A1B0GVK7 77 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 C16orf97H3BN30 126 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 BAALC-AS2P0C853 105 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 CRIP2P52943 208 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-205ENST00000406768 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
PSEN1-205ENST00000406768 PINLYPA6NC86 204 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 RHOHQ15669 191 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 C17orf82Q86X59 251 aaPredicted RBP7.06□□□□□ -1.28
PSEN1-205ENST00000406768 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 AKAP6Q13023 2319 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 CACNA1HO95180 2353 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 ADARB2-AS1A8MUL3 147 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 TRGV3P03979 118 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 PMS2CLQ68D20 193 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 C10orf105Q8TEF2 133 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 KNCNA6PVL3 124 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 CRIP1P50238 77 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 ECSCRQ19T08 205 aa7.06□□□□□ -1.28
PSEN1-205ENST00000406768 IGHV1-69DA0A0B4J2H0 117 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 IGKV3D-20A0A0C4DH25 116 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 A0A0U1RQV1 116 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 LEPROTO15243 131 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 ZNF576Q9H609 170 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 TPSG1Q9NRR2 321 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 NOTCH4Q99466 2003 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 CACNA1AO00555 2505 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 INS-IGF2F8WCM5 200 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 M0R1W7 72 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 RNASE4P34096 147 aaKnown RBP7.05□□□□□ -1.28
PSEN1-205ENST00000406768 ZNF833PQ6ZTB9 187 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 C11orf53Q8IXP5 236 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 PIP4P2Q8N4L2 257 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
PSEN1-205ENST00000406768 ODF3Q96PU9 254 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 CADP27708 2225 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 SOCS3O14543 225 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 TRIAP1O43715 76 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 UBE2E1P51965 193 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
PSEN1-205ENST00000406768 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
PSEN1-205ENST00000406768 ZNF491Q8N8L2 437 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 PRO3102Q9H379 93 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 TRBV30A0A0K0K1B3 111 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 E7EUB6 86 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 IGLV2-11P01706 119 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 CFHR4Q92496 578 aa7.04□□□□□ -1.28
PSEN1-205ENST00000406768 MUC22E2RYF6 1773 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms