RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 ONECUT1Q9UBC0 465 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 MRPS12O15235 138 aaKnown RBP12.56□□□□□ -0.4
LSP1-204ENST00000406638 HOXA3O43365 443 aaPredicted RBP12.56□□□□□ -0.4
LSP1-204ENST00000406638 KLRD1Q13241 179 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 RPEQ96AT9 228 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 RNF125Q96EQ8 232 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
LSP1-204ENST00000406638 CHD6Q8TD26 2715 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 IGLC6P0CF74 106 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 NCBP2LA6PVI3 153 aaKnown RBP12.55□□□□□ -0.4
LSP1-204ENST00000406638 TSPAN13O95857 204 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 ZFP36P26651 326 aaKnown RBP12.55□□□□□ -0.4
LSP1-204ENST00000406638 PSMB2P49721 201 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
LSP1-204ENST00000406638 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
LSP1-204ENST00000406638 EFNA4P52798 201 aa12.54□□□□□ -0.4
LSP1-204ENST00000406638 ZFP2Q6ZN57 461 aa12.54□□□□□ -0.4
LSP1-204ENST00000406638 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
LSP1-204ENST00000406638 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
LSP1-204ENST00000406638 PLGLAQ15195 96 aa12.53□□□□□ -0.4
LSP1-204ENST00000406638 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
LSP1-204ENST00000406638 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
LSP1-204ENST00000406638 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 CRYGBP07316 175 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 HLA-DMBP28068 263 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 TIMD4Q96H15 378 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 BPESC1Q9GZL8 116 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 ERG28Q9UKR5 140 aa12.52□□□□□ -0.4
LSP1-204ENST00000406638 LINC01549A6NIU2 74 aa12.52□□□□□ -0.41
LSP1-204ENST00000406638 K7EIM0 57 aa12.52□□□□□ -0.41
LSP1-204ENST00000406638 CFAP161Q6P656 301 aa12.52□□□□□ -0.41
LSP1-204ENST00000406638 Q8N8P6 123 aa12.52□□□□□ -0.41
LSP1-204ENST00000406638 DLX4Q92988 240 aaPredicted RBP12.52□□□□□ -0.41
LSP1-204ENST00000406638 A0A087WX48 190 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 PRSS29PA6NIE9 313 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 IGHV4-39P01824 125 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 LINC00311Q8N616 119 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 CARD19Q96LW7 228 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 ANAPC13Q9BS18 74 aa12.51□□□□□ -0.41
LSP1-204ENST00000406638 IGLV2-18A0A075B6J9 118 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 C5orf64Q2M2E5 130 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 KLK15Q9H2R5 256 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 CNIH1O95406 144 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 TRGV3P03979 118 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
LSP1-204ENST00000406638 PTPN13Q12923 2485 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 IGLV1-47P01700 117 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 TGFAP01135 160 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 LAGE3Q14657 143 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 LY6G5BQ8NDX9 201 aa12.49□□□□□ -0.41
LSP1-204ENST00000406638 SRSF8Q9BRL6 282 aaKnown RBP12.49□□□□□ -0.41
LSP1-204ENST00000406638 ABCA12Q86UK0 2595 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 B5MCH6 92 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 LGALS1P09382 135 aaKnown RBP12.48□□□□□ -0.41
LSP1-204ENST00000406638 PLNP26678 52 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 ERCC8Q13216 396 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 PDE6HQ13956 83 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
LSP1-204ENST00000406638 IGHV3OR16-8A0A075B7F1 116 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 ANXA2RQ3ZCQ2 193 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 USP9YO00507 2555 aaPredicted RBP12.47□□□□□ -0.41
LSP1-204ENST00000406638 NBPF19A0A087WUL8 3843 aa12.47□□□□□ -0.41
LSP1-204ENST00000406638 IGHV1-3A0A0C4DH29 117 aa12.46□□□□□ -0.41
LSP1-204ENST00000406638 FABP5P3A8MUU1 101 aa12.46□□□□□ -0.41
LSP1-204ENST00000406638 H3BVH4 76 aa12.46□□□□□ -0.41
LSP1-204ENST00000406638 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.41
LSP1-204ENST00000406638 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
LSP1-204ENST00000406638 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.42
LSP1-204ENST00000406638 TMEM78Q5T7P6 136 aa12.46□□□□□ -0.42
LSP1-204ENST00000406638 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.42
LSP1-204ENST00000406638 C8orf31Q8N9H6 132 aa12.46□□□□□ -0.42
LSP1-204ENST00000406638 IGHV3-23P01764 117 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 H7C1H1 209 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 IGHG4P01861 327 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 SCGB1D4Q6XE38 83 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 TEN1Q86WV5 123 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 PSMG3-AS1Q96PY0 264 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 CCL19Q99731 98 aa12.45□□□□□ -0.42
LSP1-204ENST00000406638 F8VRH5 84 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 LMO4P61968 165 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 GAGE5Q13069 117 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 GAGE6Q13070 117 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 NRACQ8N912 160 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 TMEM190Q8WZ59 177 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 A6NJY4 79 aa12.44□□□□□ -0.42
LSP1-204ENST00000406638 VMO1Q7Z5L0 202 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms