RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 CKS2P33552 79 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 SPATA45Q537H7 98 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 PRR31Q5SQ13 230 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 C20orf173Q96LM9 149 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 UBE2E2Q96LR5 201 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 C2orf88Q9BSF0 95 aa13.02□□□□□ -0.32
LSP1-203ENST00000405957 NSD1Q96L73 2696 aaPredicted RBP13.02□□□□□ -0.33
LSP1-203ENST00000405957 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 CSN3P07498 182 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 TM4SF20Q53R12 229 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 DUX5Q96PT3 197 aa13.02□□□□□ -0.33
LSP1-203ENST00000405957 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
LSP1-203ENST00000405957 M0R143 59 aa13.01□□□□□ -0.33
LSP1-203ENST00000405957 UQCR10Q9UDW1 63 aa13.01□□□□□ -0.33
LSP1-203ENST00000405957 IGHV4-4A0A075B6R2 117 aa13□□□□□ -0.33
LSP1-203ENST00000405957 SNAI2O43623 268 aa13□□□□□ -0.33
LSP1-203ENST00000405957 ZNF705AQ6ZN79 300 aaPredicted RBP13□□□□□ -0.33
LSP1-203ENST00000405957 APRG1Q8IVJ8 170 aa13□□□□□ -0.33
LSP1-203ENST00000405957 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
LSP1-203ENST00000405957 DNAJC9-AS1A6NH13 148 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 LGALS9O00182 355 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 FAM19A4Q96LR4 140 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 SIGLEC8Q9NYZ4 499 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 TCF21O43680 179 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 MED14OSP0DP75 135 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 SPATA12Q7Z6I5 190 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
LSP1-203ENST00000405957 INAFM1C9JVW0 142 aa12.98□□□□□ -0.33
LSP1-203ENST00000405957 MAP1LC3AQ9H492 121 aa12.98□□□□□ -0.33
LSP1-203ENST00000405957 C11orf21Q9P2W6 132 aa12.98□□□□□ -0.33
LSP1-203ENST00000405957 MUC21A0A0G2JKD1 596 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 MUC21A0A140T8X8 626 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 IFI27P40305 119 aaPredicted RBP12.97□□□□□ -0.33
LSP1-203ENST00000405957 SSTP61278 116 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 MUC21Q5SSG8 566 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 A0A087WW49 117 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 IGLC3P0DOY3 106 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 SRD5A1P18405 259 aa12.97□□□□□ -0.33
LSP1-203ENST00000405957 NXT2Q9NPJ8 142 aaKnown RBP12.97□□□□□ -0.33
LSP1-203ENST00000405957 OR4C46A6NHA9 309 aa12.96□□□□□ -0.34
LSP1-203ENST00000405957 SCGB2A2Q13296 93 aa12.96□□□□□ -0.34
LSP1-203ENST00000405957 DCANP1Q8TF63 244 aa12.96□□□□□ -0.34
LSP1-203ENST00000405957 ODF3Q96PU9 254 aa12.96□□□□□ -0.34
LSP1-203ENST00000405957 ZNF747Q9BV97 191 aa12.96□□□□□ -0.34
LSP1-203ENST00000405957 LINC01546A6NGU7 62 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 HBDP02042 147 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 ST20Q9HBF5 79 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 CUBNO60494 3623 aa12.95□□□□□ -0.34
LSP1-203ENST00000405957 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 NPYP01303 97 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 EDN2P20800 178 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
LSP1-203ENST00000405957 ASIPP42127 132 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
LSP1-203ENST00000405957 PRR9Q5T870 116 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 Q6ZSV7 163 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 FN1P02751 2386 aaKnown RBP12.94□□□□□ -0.34
LSP1-203ENST00000405957 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 LINC01545Q5VT33 79 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 SNHG12Q9BXW3 62 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
LSP1-203ENST00000405957 SYNJ2BPP57105 145 aa12.93□□□□□ -0.34
LSP1-203ENST00000405957 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
LSP1-203ENST00000405957 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 TNFRSF6BO95407 300 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 S100A4P26447 101 aaKnown RBP12.92□□□□□ -0.34
LSP1-203ENST00000405957 LINC00173Q6ZV60 143 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 C4orf3Q8WVX3 66 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 KLLNB2CW77 178 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 H3BVH4 76 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 EREGO14944 169 aa12.92□□□□□ -0.34
LSP1-203ENST00000405957 TEP1Q99973 2627 aaKnown RBP12.91□□□□□ -0.34
LSP1-203ENST00000405957 SMKR1H3BMG3 65 aa12.91□□□□□ -0.34
LSP1-203ENST00000405957 NCR2O95944 276 aa12.91□□□□□ -0.34
LSP1-203ENST00000405957 LEPP41159 167 aa12.91□□□□□ -0.34
LSP1-203ENST00000405957 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
LSP1-203ENST00000405957 Q6ZN92 141 aa12.91□□□□□ -0.34
LSP1-203ENST00000405957 A0A096LNJ9 63 aa12.9□□□□□ -0.34
LSP1-203ENST00000405957 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
LSP1-203ENST00000405957 TCTEX1D4Q5JR98 221 aa12.9□□□□□ -0.34
LSP1-203ENST00000405957 K7EQG2 157 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 CRLF1O75462 422 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
LSP1-203ENST00000405957 IGLL1P15814 213 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 EVI2AP22794 236 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 OR2K2Q8NGT1 345 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
LSP1-203ENST00000405957 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms