RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FAM57AQ8TBR7 257 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 M0R3E3 92 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 CD7P09564 240 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 CKS2P33552 79 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 FXYD7P58549 80 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 ZNF672Q499Z4 452 aaPredicted RBP12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 ZNF491Q8N8L2 437 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 PLGLAQ15195 96 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 PRSS33Q8NF86 280 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 PIFOQ8TCI5 191 aa12.58□□□□□ -0.4
COL4A3BP-204ENST00000405807 MRPS12O15235 138 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 ATP5LO75964 103 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 PDE6HQ13956 83 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 SH2D1AO60880 128 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 IGLV1-47P01700 117 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 ABCA1O95477 2261 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 BUB1B-PAK6H3BSN5 160 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 K7EIM0 57 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 PRO0628Q9UI54 55 aa12.57□□□□□ -0.4
COL4A3BP-204ENST00000405807 RNF5Q99942 180 aa12.56□□□□□ -0.4
COL4A3BP-204ENST00000405807 TRAV2A0A0B4J234 112 aa12.56□□□□□ -0.4
COL4A3BP-204ENST00000405807 CRYGDP07320 174 aa12.56□□□□□ -0.4
COL4A3BP-204ENST00000405807 PKIGQ9Y2B9 76 aa12.56□□□□□ -0.4
COL4A3BP-204ENST00000405807 NPYP01303 97 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 TWIST1Q15672 202 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 WI2-2373I1.2A0A1W2PRP0 233 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 UQCRQO14949 82 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 BSPH1Q075Z2 132 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 HHLA3Q9XRX5 114 aa12.55□□□□□ -0.4
COL4A3BP-204ENST00000405807 MALP21145 153 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 COX8CQ7Z4L0 72 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 Q5XG85 94 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 LINC00526Q96FQ7 95 aa12.54□□□□□ -0.4
COL4A3BP-204ENST00000405807 SHISA9B4DS77 424 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 TCL1BO95988 128 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 V9GYY9 64 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 DMXL1Q9Y485 3027 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 DLX1P56177 255 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 GAGE2AQ6NT46 116 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 IGFL3Q6UXB1 125 aa12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
COL4A3BP-204ENST00000405807 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.4
COL4A3BP-204ENST00000405807 MAPKAPK5-AS1Q8N8E1 139 aa12.52□□□□□ -0.4
COL4A3BP-204ENST00000405807 UBE2D3P61077 147 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 UBE2D2P62837 147 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 LYRM7Q5U5X0 104 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 WFDC3Q8IUB2 231 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 PRR25Q96S07 402 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 DYNLRB1Q9NP97 96 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 EGR2P11161 476 aaPredicted RBP12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 SPANXCQ9NY87 97 aa12.52□□□□□ -0.41
COL4A3BP-204ENST00000405807 IGFBPL1Q8WX77 278 aa12.51□□□□□ -0.41
COL4A3BP-204ENST00000405807 ZMAT4Q9H898 229 aa12.51□□□□□ -0.41
COL4A3BP-204ENST00000405807 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
COL4A3BP-204ENST00000405807 LINC01546A6NGU7 62 aa12.51□□□□□ -0.41
COL4A3BP-204ENST00000405807 MALRD1Q5VYJ5 2156 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 LEPP41159 167 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 Q8N1Y9 231 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 DMXL2Q8TDJ6 3036 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 PRSS1P07477 247 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 COX7A1P24310 79 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 ZNF415Q09FC8 603 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 JPT2Q9H910 190 aa12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
COL4A3BP-204ENST00000405807 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
COL4A3BP-204ENST00000405807 SLC25A20O43772 301 aa12.49□□□□□ -0.41
COL4A3BP-204ENST00000405807 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
COL4A3BP-204ENST00000405807 IGKCP01834 107 aa12.48□□□□□ -0.41
COL4A3BP-204ENST00000405807 GFRALQ6UXV0 394 aa12.48□□□□□ -0.41
COL4A3BP-204ENST00000405807 OXTP01178 125 aa12.48□□□□□ -0.41
COL4A3BP-204ENST00000405807 RNF185Q96GF1 192 aa12.48□□□□□ -0.41
COL4A3BP-204ENST00000405807 ROS1P08922 2347 aa12.48□□□□□ -0.41
COL4A3BP-204ENST00000405807 PMVKQ15126 192 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 OR11H6Q8NGC7 330 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 NTN5Q8WTR8 489 aaPredicted RBP12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 S4R3C0 116 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 A0A0G2JNJ9 132 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 LY6LH3BQJ8 138 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 TIMM23O14925 209 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 ZNF56Q15929 161 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 Q9UFV3 132 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 GVINP1Q7Z2Y8 2422 aa12.47□□□□□ -0.41
COL4A3BP-204ENST00000405807 NBR2O15453 112 aa12.46□□□□□ -0.41
COL4A3BP-204ENST00000405807 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms