RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
NUCB1-201ENST00000405315 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
NUCB1-201ENST00000405315 MRPL35Q9NZE8 188 aaKnown RBP11.14□□□□□ -0.63
NUCB1-201ENST00000405315 TRAV40A0A0B4J280 105 aa11.14□□□□□ -0.63
NUCB1-201ENST00000405315 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
NUCB1-201ENST00000405315 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
NUCB1-201ENST00000405315 CRIP2P52943 208 aaPredicted RBP11.13□□□□□ -0.63
NUCB1-201ENST00000405315 FXYD2P54710 66 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 IGHV1-69P01742 117 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
NUCB1-201ENST00000405315 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 A0A1W2PPM0 123 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 M0R381 172 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 IGHV4-39P01824 125 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
NUCB1-201ENST00000405315 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 SMIM2Q9BVW6 85 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 K7ERU9 68 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 SPRY2O43597 315 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 DEFB1P60022 68 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 LINC00477Q96M19 166 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 A0A087WX48 190 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 NDUFA4O00483 81 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
NUCB1-201ENST00000405315 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 HLA-DRB4P13762 266 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 SOCS3O14543 225 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 OVOL1O14753 267 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 IGHV3-11P01762 117 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
NUCB1-201ENST00000405315 LY6EQ16553 131 aa11.11□□□□□ -0.63
NUCB1-201ENST00000405315 ASIPP42127 132 aa11.1□□□□□ -0.63
NUCB1-201ENST00000405315 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
NUCB1-201ENST00000405315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.1□□□□□ -0.63
NUCB1-201ENST00000405315 K7ERJ3 54 aa11.1□□□□□ -0.63
NUCB1-201ENST00000405315 SAP30O75446 220 aa11.1□□□□□ -0.63
NUCB1-201ENST00000405315 RPL11P62913 178 aaKnown RBP11.1□□□□□ -0.63
NUCB1-201ENST00000405315 FABP2P12104 132 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 PLNP26678 52 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 ANXA2RQ3ZCQ2 193 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 RASL10AQ92737 203 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
NUCB1-201ENST00000405315 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 F6UB75 175 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 MGPP08493 103 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
NUCB1-201ENST00000405315 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
NUCB1-201ENST00000405315 CEND1Q8N111 149 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
NUCB1-201ENST00000405315 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
NUCB1-201ENST00000405315 IGHV4-61A0A0C4DH41 118 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 IGHV4-38-2P0DP08 117 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 ORMDL2Q53FV1 153 aa11.08□□□□□ -0.64
NUCB1-201ENST00000405315 NHP2Q9NX24 153 aaKnown RBP11.08□□□□□ -0.64
NUCB1-201ENST00000405315 PF4V1P10720 104 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 MEGF9Q9H1U4 602 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 ZFHX3Q15911 3703 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 F8VRH5 84 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 H3BUX3 64 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 USMG5Q96IX5 58 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
NUCB1-201ENST00000405315 TRAV12-1A0A0B4J245 112 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 H7C1H1 209 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 TOMM6Q96B49 74 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 TM2D2Q9BX73 214 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 K7EMI3 77 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 IGHG2P01859 326 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 GNLYP22749 145 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 FAM19A4Q96LR4 140 aa11.06□□□□□ -0.64
NUCB1-201ENST00000405315 H3BUA1 57 aa11.05□□□□□ -0.64
NUCB1-201ENST00000405315 SLC25A16P16260 332 aa11.05□□□□□ -0.64
NUCB1-201ENST00000405315 PHLDA1Q8WV24 401 aaPredicted RBP11.05□□□□□ -0.64
NUCB1-201ENST00000405315 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
NUCB1-201ENST00000405315 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
NUCB1-201ENST00000405315 GNRH2O43555 120 aa11.05□□□□□ -0.64
NUCB1-201ENST00000405315 MED14OSP0DP75 135 aa11.05□□□□□ -0.64
NUCB1-201ENST00000405315 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
NUCB1-201ENST00000405315 A6NDX4 124 aa11.04□□□□□ -0.64
NUCB1-201ENST00000405315 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
NUCB1-201ENST00000405315 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
NUCB1-201ENST00000405315 BLCAPP62952 87 aa11.03□□□□□ -0.64
NUCB1-201ENST00000405315 Q6ZS46 218 aa11.03□□□□□ -0.64
NUCB1-201ENST00000405315 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
NUCB1-201ENST00000405315 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
NUCB1-201ENST00000405315 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms