RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ZFP82Q8N141 532 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 OR2K2Q8NGT1 345 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 FRZBQ92765 325 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 FAM19A4Q96LR4 140 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 MCRIP2Q9BUT9 160 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 C7orf71A4D174 169 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1BA6NDE4 496 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1EA6NEQ0 496 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 KLLNB2CW77 178 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 TRGC2P03986 189 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1DP0C7P1 496 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 CRISP2P16562 243 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 BEAN1Q3B7T3 259 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 OXLD1Q5BKU9 147 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 DEFB125Q8N687 156 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 XCL2Q9UBD3 114 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 CMYA5Q8N3K9 4069 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 IGHV3OR16-12A0A075B7B8 117 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 SPRY2O43597 315 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 S100A4P26447 101 aaKnown RBP2.74□□□□□ -1.97
RTN4-208ENST00000404909 ANXA2RQ3ZCQ2 193 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 LINC01559Q495D7 138 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 LYZL1Q6UWQ5 148 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 AMTNQ6UX39 209 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 WFDC9Q8NEX5 89 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 MDFIQ99750 246 aa2.74□□□□□ -1.97
RTN4-208ENST00000404909 TRBV7-9A0A0J9YWB2 115 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 SNURFLB1AK76 121 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 GNRH2O43555 120 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 ARMS2P0C7Q2 107 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 CMC4P56277 68 aaPredicted RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 RPS20P60866 119 aaKnown RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 Q6AWC8 147 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 FER1L6-AS1Q8NA97 138 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 BORCS7Q96B45 105 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 ODF3Q96PU9 254 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 PYGO2Q9BRQ0 406 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TMEM208Q9BTX3 173 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 GFRA4Q9GZZ7 299 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 CHTOPQ9Y3Y2 248 aaKnown RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 A0A1B0GUT8 65 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 C1orf196B1AJZ1 125 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 H3BVH4 76 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 PRM2P04554 102 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 NUTF2P61970 127 aaKnown RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 FABP9Q0Z7S8 132 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 SSBP4Q9BWG4 385 aaPredicted RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 SRD5A3Q9H8P0 318 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 C19orf73Q9NVV2 129 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TRAPPC1Q9Y5R8 145 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TRAV9-1A0A075B6T8 112 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 FAM231BA6NCW3 169 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 ZNF324O75467 553 aaPredicted RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 HBBP68871 147 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TWIST1Q15672 202 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TRPT1Q86TN4 253 aaKnown RBP2.73□□□□□ -1.97
RTN4-208ENST00000404909 ZNF575Q86XF7 245 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 TP53TG3Q9ULZ0 132 aa2.73□□□□□ -1.97
RTN4-208ENST00000404909 CBY3A6NI87 242 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 TYMSP04818 313 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1A1P0DJD3 496 aaKnown RBP2.72□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1CP0DJD4 496 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 NTF3P20783 257 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 ASIPP42127 132 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 RBMY1FQ15415 496 aaKnown RBP2.72□□□□□ -1.97
RTN4-208ENST00000404909 KIAA1644Q3SXP7 199 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 LINC01587Q99440 93 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 IGHV1OR15-1A0A075B7D0 117 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 M0R381 172 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 INSP01308 110 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 FOXA3P55318 350 aaPredicted RBP2.72□□□□□ -1.97
RTN4-208ENST00000404909 RAB5BP61020 215 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 RIGQ13278 110 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 SPANXN1Q5VSR9 72 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 Q8N1Y9 231 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 OR10AG1Q8NH19 301 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 MRPL18Q9H0U6 180 aaKnown RBP2.72□□□□□ -1.97
RTN4-208ENST00000404909 MSRB1Q9NZV6 116 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 IGLC6P0CF74 106 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 WDR73Q6P4I2 378 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 TMEM136Q6ZRR5 245 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 ATP5L2Q7Z4Y8 100 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 KCNS1Q96KK3 526 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 FAM110AQ9BQ89 295 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 GNB1LQ9BYB4 327 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 MDFICQ9P1T7 246 aa2.72□□□□□ -1.97
RTN4-208ENST00000404909 A8MTW9 85 aa2.71□□□□□ -1.97
RTN4-208ENST00000404909 F2Z2F3 143 aa2.71□□□□□ -1.97
RTN4-208ENST00000404909 TRGC1P0CF51 173 aa2.71□□□□□ -1.97
RTN4-208ENST00000404909 SLAQ13239 276 aa2.71□□□□□ -1.97
RTN4-208ENST00000404909 A0A1B0GXF2 115 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 G3V4G9 280 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HLA-DQA1P01909 254 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 APCSP02743 223 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 CTRLP40313 264 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 HIST1H2BKO60814 126 aa2.71□□□□□ -1.98
RTN4-208ENST00000404909 MT-ND6P03923 174 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms