RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PFDN1O60925 122 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 SFTA3P0C7M3 94 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 TMUB2Q71RG4 321 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 SDF2L1Q9HCN8 221 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
PTPRN2-204ENST00000404321 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
PTPRN2-204ENST00000404321 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
PTPRN2-204ENST00000404321 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
PTPRN2-204ENST00000404321 Q6ZR54 194 aa12.61□□□□□ -0.39
PTPRN2-204ENST00000404321 STOML3Q8TAV4 291 aa12.61□□□□□ -0.39
PTPRN2-204ENST00000404321 RTL8CO15255 209 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 PAX4O43316 350 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 ESRGQ1W209 222 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 CST9LP1Q5W188 147 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 SFT2D1Q8WV19 159 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 SPXQ9BT56 116 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 ARL2-SNX15V9GYD0 113 aa12.6□□□□□ -0.39
PTPRN2-204ENST00000404321 A0A096LPF7 62 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 H3BNG1 76 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 PFN1P07737 140 aaKnown RBP12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 FHL2Q14192 279 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 SAPCD1Q5SSQ6 148 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 RASL10AQ92737 203 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
PTPRN2-204ENST00000404321 hCG_2014768A0A024R1R8 64 aa12.58□□□□□ -0.4
PTPRN2-204ENST00000404321 TRGV4A0A0C4DH28 118 aa12.58□□□□□ -0.4
PTPRN2-204ENST00000404321 PPT1P50897 306 aa12.58□□□□□ -0.4
PTPRN2-204ENST00000404321 Q86TA4 180 aa12.58□□□□□ -0.4
PTPRN2-204ENST00000404321 HHLA3Q9XRX5 114 aa12.58□□□□□ -0.4
PTPRN2-204ENST00000404321 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 UMAD1C9J7I0 102 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 M0R2P5 195 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 PAGE4O60829 102 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 Q6ZNX1 250 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 HIST1H2BAQ96A08 127 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 NKX6-2Q9C056 277 aaPredicted RBP12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
PTPRN2-204ENST00000404321 NBDYA0A0U1RRE5 68 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 C9JCJ5 164 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 CRYBA4P53673 196 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 LINC00336Q6ZUF6 198 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 MBD3L1Q8WWY6 194 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 ICOSQ9Y6W8 199 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 PRSS29PA6NIE9 313 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 TPT1P13693 172 aaKnown RBP12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 C1orf134Q5TEV5 83 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 Q9H8V8 135 aa12.56□□□□□ -0.4
PTPRN2-204ENST00000404321 MUC4Q99102 2169 aa12.55□□□□□ -0.4
PTPRN2-204ENST00000404321 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
PTPRN2-204ENST00000404321 UBE2G1P62253 170 aa12.55□□□□□ -0.4
PTPRN2-204ENST00000404321 LGALSLQ3ZCW2 172 aaPredicted RBP12.55□□□□□ -0.4
PTPRN2-204ENST00000404321 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 H2AFB1P0C5Y9 115 aa12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 SLAQ13239 276 aa12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 ZC2HC1AQ96GY0 325 aa12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
PTPRN2-204ENST00000404321 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 AKR1C3P42330 323 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
PTPRN2-204ENST00000404321 M0R036 132 aa12.52□□□□□ -0.41
PTPRN2-204ENST00000404321 ORM1P02763 201 aa12.52□□□□□ -0.41
PTPRN2-204ENST00000404321 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-204ENST00000404321 CRIP1P50238 77 aa12.52□□□□□ -0.41
PTPRN2-204ENST00000404321 C9orf85Q96MD7 179 aa12.52□□□□□ -0.41
PTPRN2-204ENST00000404321 DNAH17Q9UFH2 4485 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 SH2D1AO60880 128 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 GYPEP15421 78 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 CCL20P78556 96 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 UPK3BQ9BT76 320 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 HECTD4Q9Y4D8 3996 aa12.51□□□□□ -0.41
PTPRN2-204ENST00000404321 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 B4DEV8 164 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 K7EQD1 137 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 C1QBP02746 253 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 ZNF506Q5JVG8 444 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 AKAP14Q86UN6 197 aa12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 PCNPQ8WW12 178 aaKnown RBP12.5□□□□□ -0.41
PTPRN2-204ENST00000404321 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 A0A1B0GVY2 172 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms