RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MEGF9Q9H1U4 602 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 GNRH2O43555 120 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 LGALS9BQ3B8N2 356 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 LGALS9CQ6DKI2 356 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 HIST1H4GQ99525 98 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 MTORP42345 2549 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 UTP20O75691 2785 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 OCIAD2Q56VL3 154 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 IGHV4-38-2P0DP08 117 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 UCNP55089 124 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 ZNF493Q6ZR52 646 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 ZNF462Q96JM2 2506 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 OVOL3O00110 214 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 RNF185Q96GF1 192 aa9.73□□□□□ -0.85
PPP4R1-202ENST00000400555 DPM2O94777 84 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 C11orf71Q6IPW1 123 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 RPL39LQ96EH5 51 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 A0A087WWL8 130 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 PPBPP02775 128 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 SCGB1D4Q6XE38 83 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 ZANQ9Y493 2812 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 FABP2P12104 132 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 HSD52Q0P140 79 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
PPP4R1-202ENST00000400555 OOSP1A8MZH6 123 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 K7ERU9 68 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 FXYD2P54710 66 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 SEC11AP67812 179 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 LAGE3Q14657 143 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.85
PPP4R1-202ENST00000400555 IGHV4-61A0A0C4DH41 118 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 RAB9AP51151 201 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 PAX2Q02962 417 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 FBXL19-AS1Q494R0 122 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 KHDC1LQ5JSQ8 128 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 Q6ZS46 218 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 EPG5Q9HCE0 2579 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 TRBV6-1A0A0K0K1D8 114 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 LMO4P61968 165 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 PRR9Q5T870 116 aa9.71□□□□□ -0.86
PPP4R1-202ENST00000400555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 RBX1P62877 108 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 Q8N6K4 173 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 OR4X2Q8NGF9 303 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 C20orf173Q96LM9 149 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 CHAC1Q9BUX1 264 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 CLPSL1A2RUU4 121 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 ZNF256Q9Y2P7 627 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 MOB4Q9Y3A3 225 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 TRAV12-3A0A0B4J271 114 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 TGFAP01135 160 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 CD300EQ496F6 205 aaPredicted RBP9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 CYSLTR1Q9Y271 337 aa9.7□□□□□ -0.86
PPP4R1-202ENST00000400555 ANKRD17O75179 2603 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 EDN2P20800 178 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 ASIPP42127 132 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 JPT2Q9H910 190 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 IGHV4-39P01824 125 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 ODF1Q14990 250 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 BOD1L2Q8IYS8 172 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 CCL19Q99731 98 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 TRBV7-1A0A0A6YYK4 115 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 SRSF1Q07955 248 aaKnown RBP eCLIP9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 CLEC2AQ6UVW9 174 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 C5orf56Q8N8D9 126 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
PPP4R1-202ENST00000400555 ITPR1Q14643 2758 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 CD7P09564 240 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 ACANP16112 2415 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 ATP5LO75964 103 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 C1orf122Q6ZSJ8 110 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 OR9G4Q8NGQ1 327 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 C9orf118A6NHY6 69 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 HIST2H2BDQ6DRA6 164 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 Q8N8P6 123 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 DPF1Q92782 380 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 CFAP46Q8IYW2 2715 aa9.68□□□□□ -0.86
PPP4R1-202ENST00000400555 OR11H12B2RN74 326 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 COTL1Q14019 142 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 OR11H1Q8NG94 326 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 OR1N2Q8NGR9 330 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 OR11H2Q8NH07 326 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms