RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 TYMSP04818 313 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 H2AFB2P0C5Z0 115 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 IGHV3-30-3P0DP02 117 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 IGHV3-30-5P0DP03 117 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 GATA1P15976 413 aaPredicted RBP7.94□□□□□ -1.14
LINC00544-201ENST00000400540 WFDC2Q14508 124 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 TDRG1Q3Y452 100 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
LINC00544-201ENST00000400540 OR5AC2Q9NZP5 309 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 RPH3ALQ9UNE2 315 aa7.94□□□□□ -1.14
LINC00544-201ENST00000400540 SIX6O95475 246 aa7.93□□□□□ -1.14
LINC00544-201ENST00000400540 TIRAPP58753 221 aa7.93□□□□□ -1.14
LINC00544-201ENST00000400540 OR10J3Q5JRS4 329 aa7.93□□□□□ -1.14
LINC00544-201ENST00000400540 Q8N3U1 123 aa7.93□□□□□ -1.14
LINC00544-201ENST00000400540 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
LINC00544-201ENST00000400540 H0YIZ8 118 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 LRRC37A5PQ49AS3 106 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 DPPA3Q6W0C5 159 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 SLC25A29Q8N8R3 303 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 TVP23CQ96ET8 276 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 LENEPQ9Y5L5 61 aa7.92□□□□□ -1.14
LINC00544-201ENST00000400540 TRAV8-1A0A0A6YYK1 113 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 IGHV3-73A0A0B4J1V6 119 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 TRAV8-6A0A0B4J262 113 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 FBLL1A6NHQ2 334 aaKnown RBP7.91□□□□□ -1.14
LINC00544-201ENST00000400540 FFAR4Q5NUL3 377 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
LINC00544-201ENST00000400540 TRAV21A0A0B4J279 112 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 PGPA6NDG6 321 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 C17orf112F2Z3M2 114 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 LECT2O14960 151 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 GNG5P63218 68 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 KHDC3LQ587J8 217 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 Q6ZSA8 131 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 GOLT1AQ6ZVE7 132 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 TMED6Q8WW62 240 aa7.9□□□□□ -1.14
LINC00544-201ENST00000400540 FAM240BA0A1B0GVZ2 78 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
LINC00544-201ENST00000400540 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
LINC00544-201ENST00000400540 LINC01620Q4KN68 170 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 LELP1Q5T871 98 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 CFAP126Q5VTH2 177 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 ATP5SQ99766 215 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 SDF2L1Q9HCN8 221 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 OTORQ9NRC9 128 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 C11orf21Q9P2W6 132 aa7.89□□□□□ -1.15
LINC00544-201ENST00000400540 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-201ENST00000400540 RS1O15537 224 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 C1QBP02746 253 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
LINC00544-201ENST00000400540 ZNF80P51504 273 aaPredicted RBP7.88□□□□□ -1.15
LINC00544-201ENST00000400540 RHOHQ15669 191 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 ZNF876PQ49A33 203 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 TMEM75Q8N9X5 138 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 CMTM2Q8TAZ6 248 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 ASB13Q8WXK3 278 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 NMES1Q9C002 83 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 TREM1Q9NP99 234 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 MBD2Q9UBB5 411 aa7.88□□□□□ -1.15
LINC00544-201ENST00000400540 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 TAS2R45P59539 299 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 LAGE3Q14657 143 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 KCNS1Q96KK3 526 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 SMIM3Q9BZL3 60 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 GTSF1LQ9H1H1 148 aa7.87□□□□□ -1.15
LINC00544-201ENST00000400540 PGPEP1LA6NFU8 196 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 HMGB3O15347 200 aaKnown RBP7.86□□□□□ -1.15
LINC00544-201ENST00000400540 ZNF506Q5JVG8 444 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 SCXQ7RTU7 201 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 DAZ4Q86SG3 579 aaKnown RBP7.86□□□□□ -1.15
LINC00544-201ENST00000400540 ATP6V0E2Q8NHE4 81 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 C9orf85Q96MD7 179 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 CCDC32Q9BV29 185 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 DAZ3Q9NR90 486 aaKnown RBP7.86□□□□□ -1.15
LINC00544-201ENST00000400540 HSPB11Q9Y547 144 aa7.86□□□□□ -1.15
LINC00544-201ENST00000400540 H2BFSP57053 126 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
LINC00544-201ENST00000400540 FAM74A1Q5RGS3 127 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 DEFB104AQ8WTQ1 72 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 PPP1R1CQ8WVI7 109 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 BAALCQ8WXS3 180 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 DNAJC30Q96LL9 226 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 TM2D2Q9BX73 214 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 Q9UF83 564 aa7.85□□□□□ -1.15
LINC00544-201ENST00000400540 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 LINC00694P0DN24 101 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
LINC00544-201ENST00000400540 RAB2AP61019 212 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 GAGE1Q13065 139 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 GAGE4Q13068 117 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 GAGE5Q13069 117 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 ASAH1Q13510 395 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 GAGE13Q4V321 117 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 MZT2BQ6NZ67 158 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 WFDC1Q9HC57 220 aa7.84□□□□□ -1.15
LINC00544-201ENST00000400540 GCGP01275 180 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms