RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 SPRY2O43597 315 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 HERVK_113P63121 156 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 B4DSR2 109 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 FOXI1Q12951 378 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 FAM167A-AS1Q96KT0 104 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
CTNND1-205ENST00000399050 LY6DQ14210 128 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 SPRNQ5BIV9 151 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 TTTY13Q9BZ97 58 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 AGPAT4-IT1Q9H0P7 198 aa6.79□□□□□ -1.32
CTNND1-205ENST00000399050 NUP210Q8TEM1 1887 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-205ENST00000399050 KIAA1549LQ6ZVL6 1849 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 CRLF1O75462 422 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-205ENST00000399050 ALPK3Q96L96 1907 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 RHOHQ15669 191 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 MSRB1Q9NZV6 116 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 DEFB130BP0DP73 79 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 DEFB130AP0DP74 79 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
CTNND1-205ENST00000399050 RITA1Q96K30 269 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 DSCR8Q96T75 97 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 ARHGAP21Q5T5U3 1957 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 NXPH4O95158 308 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 ACYP1P07311 99 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 CR1LQ2VPA4 569 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 C8orf31Q8N9H6 132 aa6.78□□□□□ -1.32
CTNND1-205ENST00000399050 EML6Q6ZMW3 1958 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 NCKAP5O14513 1909 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
CTNND1-205ENST00000399050 C22orf46C9J442 243 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 F6UB75 175 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 PLA2G5P39877 138 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 IGHV1-69DA0A0B4J2H0 117 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 IGHV7-4-1A0A0J9YVY3 117 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 I3L2K1 104 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 IGHV1-69P01742 117 aa6.77□□□□□ -1.33
CTNND1-205ENST00000399050 SPATA12Q7Z6I5 190 aa6.76□□□□□ -1.33
CTNND1-205ENST00000399050 ZNF106Q9H2Y7 1883 aaKnown RBP6.76□□□□□ -1.33
CTNND1-205ENST00000399050 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-205ENST00000399050 IGKV2-29A2NJV5 120 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-205ENST00000399050 A4D1N5 150 aa6.76□□□□□ -1.33
CTNND1-205ENST00000399050 PRSS47A8MTI9 375 aa6.76□□□□□ -1.33
CTNND1-205ENST00000399050 LHBP01229 141 aa6.76□□□□□ -1.33
CTNND1-205ENST00000399050 Q9H8V8 135 aa6.76□□□□□ -1.33
CTNND1-205ENST00000399050 TRAV26-1A0A087WT03 109 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 LINC01619G3V211 115 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 BAALCQ8WXS3 180 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 KIF26AQ9ULI4 1882 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-205ENST00000399050 ODF3L1Q8IXM7 274 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 IGFBPL1Q8WX77 278 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 TRAV25A0A0B4J276 109 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 FAM236AA0A1B0GUQ0 79 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 FAM236BA0A1B0GV22 79 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
CTNND1-205ENST00000399050 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 LINC01620Q4KN68 170 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 PRR30Q53SZ7 412 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-205ENST00000399050 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 TOMM6Q96B49 74 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 NOTCH4Q99466 2003 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 RBM3P98179 157 aaKnown RBP6.74□□□□□ -1.33
CTNND1-205ENST00000399050 ODF1Q14990 250 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 ATP6V0E2Q8NHE4 81 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 RNF138Q8WVD3 245 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 KAAG1Q9UBP8 84 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 ZNF318Q5VUA4 2279 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 IGKV1OR2-108A0A075B7D4 117 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 K7EIM0 57 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 PRSS33Q8NF86 280 aa6.74□□□□□ -1.33
CTNND1-205ENST00000399050 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-205ENST00000399050 GNLYP22749 145 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 LENEPQ9Y5L5 61 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 E9PLD3 99 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 NDUFC2O95298 119 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 MSMBP08118 114 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 CHKB-CPT1BH3BT56 60 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
CTNND1-205ENST00000399050 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 GDF5OSQ5U4N7 250 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 ZNF407Q9C0G0 2248 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 IGKV3D-7A0A0C4DH55 119 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 IGKV1-17P01599 117 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 TMEM131Q92545 1883 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 WI2-2373I1.2A0A1W2PRP0 233 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 CTRLP40313 264 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms