RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 NRACQ8N912 160 aa14.9□□□□□ -0.02
COL13A1-205ENST00000398978 WFDC12Q8WWY7 111 aa14.9□□□□□ -0.02
COL13A1-205ENST00000398978 SRD5A1P18405 259 aa14.9□□□□□ -0.02
COL13A1-205ENST00000398978 HIF1ANQ9NWT6 349 aa14.89□□□□□ -0.03
COL13A1-205ENST00000398978 UTP20O75691 2785 aaKnown RBP14.89□□□□□ -0.03
COL13A1-205ENST00000398978 MAPKAPK5-AS1Q8N8E1 139 aa14.89□□□□□ -0.03
COL13A1-205ENST00000398978 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
COL13A1-205ENST00000398978 TRAV41A0A0B4J266 112 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 SRSF2Q01130 221 aaKnown RBP14.88□□□□□ -0.03
COL13A1-205ENST00000398978 SMIM15Q7Z3B0 74 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 RBAKDNA6NC62 111 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 RIPPLY3P57055 190 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 UFSP1Q6NVU6 142 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 CHAC1Q9BUX1 264 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 MEGF9Q9H1U4 602 aa14.88□□□□□ -0.03
COL13A1-205ENST00000398978 ARL3P36405 182 aa14.87□□□□□ -0.03
COL13A1-205ENST00000398978 RAB9AP51151 201 aa14.87□□□□□ -0.03
COL13A1-205ENST00000398978 RPL39LQ96EH5 51 aaKnown RBP14.87□□□□□ -0.03
COL13A1-205ENST00000398978 TRBV25-1A0A075B6N4 114 aa14.87□□□□□ -0.03
COL13A1-205ENST00000398978 LAGE3Q14657 143 aa14.87□□□□□ -0.03
COL13A1-205ENST00000398978 SPCS1Q9Y6A9 102 aa14.87□□□□□ -0.03
COL13A1-205ENST00000398978 DPM2O94777 84 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 C14orf178Q8N769 122 aaPredicted RBP14.86□□□□□ -0.03
COL13A1-205ENST00000398978 TRBV7-1A0A0A6YYK4 115 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 EDN2P20800 178 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 Q6ZS46 218 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 MYOZ3Q8TDC0 251 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
COL13A1-205ENST00000398978 ZMAT4Q9H898 229 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 NHP2Q9NX24 153 aaKnown RBP14.86□□□□□ -0.03
COL13A1-205ENST00000398978 CUBNO60494 3623 aa14.86□□□□□ -0.03
COL13A1-205ENST00000398978 K7EP34 96 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 GTF2H5Q6ZYL4 71 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 NEGR1Q7Z3B1 354 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 GPHB5Q86YW7 130 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 MGPP08493 103 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 C9orf47Q6ZRZ4 202 aa14.85□□□□□ -0.03
COL13A1-205ENST00000398978 A0A1W2PPM0 123 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 SIVA1O15304 175 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 S100A4P26447 101 aaKnown RBP14.84□□□□□ -0.03
COL13A1-205ENST00000398978 CREBBPQ92793 2442 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 GNRH2O43555 120 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 RNASE4P34096 147 aaKnown RBP14.84□□□□□ -0.03
COL13A1-205ENST00000398978 FLNCQ14315 2725 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 LINC01546A6NGU7 62 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 PIFOQ8TCI5 191 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 U3KQE9 123 aa14.84□□□□□ -0.03
COL13A1-205ENST00000398978 SMIM13P0DJ93 91 aa14.83□□□□□ -0.04
COL13A1-205ENST00000398978 IGHV4-38-2P0DP08 117 aa14.83□□□□□ -0.04
COL13A1-205ENST00000398978 Q5PR19 223 aa14.83□□□□□ -0.04
COL13A1-205ENST00000398978 SAMD5Q5TGI4 173 aa14.83□□□□□ -0.04
COL13A1-205ENST00000398978 CENPEQ02224 2701 aa14.82□□□□□ -0.04
COL13A1-205ENST00000398978 IGHV4-39P01824 125 aa14.82□□□□□ -0.04
COL13A1-205ENST00000398978 BLCAPP62952 87 aa14.82□□□□□ -0.04
COL13A1-205ENST00000398978 ANXA2RQ3ZCQ2 193 aa14.82□□□□□ -0.04
COL13A1-205ENST00000398978 ZFAND2AQ8N6M9 145 aa14.81□□□□□ -0.04
COL13A1-205ENST00000398978 MOB4Q9Y3A3 225 aa14.81□□□□□ -0.04
COL13A1-205ENST00000398978 USP9YO00507 2555 aaPredicted RBP14.81□□□□□ -0.04
COL13A1-205ENST00000398978 K7ERU9 68 aa14.81□□□□□ -0.04
COL13A1-205ENST00000398978 ATP5LO75964 103 aa14.81□□□□□ -0.04
COL13A1-205ENST00000398978 MUC4Q99102 2169 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 PF4V1P10720 104 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 SRSF1Q07955 248 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL13A1-205ENST00000398978 ZANQ9Y493 2812 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 POLQO75417 2590 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 IGHV4-61A0A0C4DH41 118 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 RASL10AQ92737 203 aa14.8□□□□□ -0.04
COL13A1-205ENST00000398978 ITLN2Q8WWU7 325 aaPredicted RBP14.79□□□□□ -0.04
COL13A1-205ENST00000398978 PHLDA3Q9Y5J5 127 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 CFAP46Q8IYW2 2715 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 FABP2P12104 132 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 MTURNQ8N3F0 131 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 SMIM2Q9BVW6 85 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 OR10J6PQ8NGY7 276 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 NPFFR1Q9GZQ6 430 aa14.79□□□□□ -0.04
COL13A1-205ENST00000398978 A0A087WX48 190 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 JPT2Q9H910 190 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 H3BUX3 64 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 GNLYP22749 145 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 EMP1P54849 157 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 UCNP55089 124 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 TMEM95Q3KNT9 176 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 SCGB3A1Q96QR1 104 aa14.78□□□□□ -0.04
COL13A1-205ENST00000398978 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.77□□□□□ -0.04
COL13A1-205ENST00000398978 C9orf139Q6ZV77 190 aa14.77□□□□□ -0.04
COL13A1-205ENST00000398978 CEND1Q8N111 149 aa14.77□□□□□ -0.05
COL13A1-205ENST00000398978 PKD1L2Q7Z442 2459 aa14.77□□□□□ -0.05
COL13A1-205ENST00000398978 IGHV1-69DA0A0B4J2H0 117 aa14.77□□□□□ -0.05
COL13A1-205ENST00000398978 IGHV1-69P01742 117 aa14.77□□□□□ -0.05
COL13A1-205ENST00000398978 SUMO2P61956 95 aaKnown RBP14.76□□□□□ -0.05
COL13A1-205ENST00000398978 RPL24P83731 157 aaKnown RBP14.76□□□□□ -0.05
COL13A1-205ENST00000398978 SVIPQ8NHG7 77 aa14.76□□□□□ -0.05
COL13A1-205ENST00000398978 MRPL53Q96EL3 112 aaKnown RBP14.76□□□□□ -0.05
COL13A1-205ENST00000398978 KLK9Q2XQG4 91 aa14.75□□□□□ -0.05
COL13A1-205ENST00000398978 KLK9Q9UKQ9 250 aa14.75□□□□□ -0.05
COL13A1-205ENST00000398978 ASIPP42127 132 aa14.75□□□□□ -0.05
COL13A1-205ENST00000398978 HIST1H4GQ99525 98 aa14.75□□□□□ -0.05
COL13A1-205ENST00000398978 C19orf54Q5BKX5 351 aa14.74□□□□□ -0.05
COL13A1-205ENST00000398978 AMTNQ6UX39 209 aa14.74□□□□□ -0.05
COL13A1-205ENST00000398978 PHLDA1Q8WV24 401 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms