RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 ZNF415Q09FC8 603 aa10.07□□□□□ -0.8
COL13A1-204ENST00000398975 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
COL13A1-204ENST00000398975 STOML3Q8TAV4 291 aa10.07□□□□□ -0.8
COL13A1-204ENST00000398975 VSIG2Q96IQ7 327 aa10.07□□□□□ -0.8
COL13A1-204ENST00000398975 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 UMAD1C9J7I0 102 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 K7EQM0 130 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 GCGP01275 180 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 IGHV3-53P01767 116 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 C1QBP02746 253 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 Q86TA4 180 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 SFT2D1Q8WV19 159 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
COL13A1-204ENST00000398975 IGLV2-18A0A075B6J9 118 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 M0R2N4 97 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 PAGE4O60829 102 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
COL13A1-204ENST00000398975 RNF212Q495C1 297 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 UBE2DNLQ8IWF7 75 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
COL13A1-204ENST00000398975 CCL20P78556 96 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 SMUG1Q53HV7 270 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 CST9LP1Q5W188 147 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 HIST1H2BAQ96A08 127 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 DNAH17Q9UFH2 4485 aa10.04□□□□□ -0.8
COL13A1-204ENST00000398975 PFN1P07737 140 aaKnown RBP10.03□□□□□ -0.8
COL13A1-204ENST00000398975 SFTA3P0C7M3 94 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 CRIP1P50238 77 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 EIF5AP63241 154 aaKnown RBP10.03□□□□□ -0.8
COL13A1-204ENST00000398975 FHL2Q14192 279 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 DPPA3Q6W0C5 159 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 Q6ZR54 194 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 AKAP14Q86UN6 197 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 RASL10AQ92737 203 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 SPXQ9BT56 116 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
COL13A1-204ENST00000398975 BIRC6Q9NR09 4857 aa10.03□□□□□ -0.8
COL13A1-204ENST00000398975 IGKV3D-20A0A0C4DH25 116 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 FBLL1A6NHQ2 334 aaKnown RBP10.02□□□□□ -0.81
COL13A1-204ENST00000398975 H3BNG1 76 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 ZNF575Q86XF7 245 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 C9orf62Q8N4C0 152 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 ZC2HC1AQ96GY0 325 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 SDF2L1Q9HCN8 221 aa10.02□□□□□ -0.81
COL13A1-204ENST00000398975 FAT2Q9NYQ8 4349 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 A0A096LPF7 62 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 M0R2P5 195 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 ESRGQ1W209 222 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 KCNS1Q96KK3 526 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 C9orf85Q96MD7 179 aa10.01□□□□□ -0.81
COL13A1-204ENST00000398975 TRBV6-1A0A0K0K1D8 114 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 SCO2A0A1W2PP80 73 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 RTL8CO15255 209 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
COL13A1-204ENST00000398975 PPT1P50897 306 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 CRYBA4P53673 196 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 ZFP69Q49AA0 526 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 COX8CQ7Z4L0 72 aa10□□□□□ -0.81
COL13A1-204ENST00000398975 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 LTAP01374 205 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 SULT1A2P50226 295 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 SLC51BQ86UW2 128 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 FMC1Q96HJ9 113 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 TCEAL7Q9BRU2 100 aa9.99□□□□□ -0.81
COL13A1-204ENST00000398975 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 PAX4O43316 350 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 SH2D1AO60880 128 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 AKR1C3P42330 323 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 CCL18P55774 89 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 FAM3BP58499 235 aaPredicted RBP9.98□□□□□ -0.81
COL13A1-204ENST00000398975 NHLRC2Q8NBF2 726 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 PRO0255Q9UI72 69 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 HHLA3Q9XRX5 114 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 ZFP30Q9Y2G7 519 aa9.98□□□□□ -0.81
COL13A1-204ENST00000398975 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
COL13A1-204ENST00000398975 RAB5CP51148 216 aa9.97□□□□□ -0.81
COL13A1-204ENST00000398975 GNG13Q9P2W3 67 aa9.97□□□□□ -0.81
COL13A1-204ENST00000398975 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 KRBOX1C9JBD0 128 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 C9JCJ5 164 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 M0R036 132 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 NKX2-5P52952 324 aaPredicted RBP9.96□□□□□ -0.82
COL13A1-204ENST00000398975 UBE2G1P62253 170 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 ZNF674Q2M3X9 581 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 ZNF876PQ49A33 203 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 OR4C5Q8NGB2 326 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 DERL1Q9BUN8 251 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
COL13A1-204ENST00000398975 LOC100131303A0A0U1RQF7 123 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms