RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SMIM7Q9BQ49 75 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 UPK3BQ9BT76 320 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 NPCDR1Q9BY65 106 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 TMPRSS5Q9H3S3 457 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 SDF2L1Q9HCN8 221 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 PPP1R14DQ9NXH3 145 aa8.32□□□□□ -1.08
TFF3-202ENST00000398431 A0A0J9YY99 117 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 F6UZH7 168 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 H7BYZ3 331 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 PDE6DO43924 150 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 SNRPCP09234 159 aaKnown RBP8.31□□□□□ -1.08
TFF3-202ENST00000398431 BTF3P20290 206 aaKnown RBP8.31□□□□□ -1.08
TFF3-202ENST00000398431 S100A2P29034 98 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 CDC34P49427 236 aaPredicted RBP8.31□□□□□ -1.08
TFF3-202ENST00000398431 SELENOTP62341 195 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 ELOBQ15370 118 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 ZNF726P1Q15940 193 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 ANAPC16Q96DE5 110 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 ZNF503Q96F45 646 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 Q9H3A6 140 aa8.31□□□□□ -1.08
TFF3-202ENST00000398431 ZNF331Q9NQX6 463 aaPredicted RBP8.31□□□□□ -1.08
TFF3-202ENST00000398431 EIF3GO75821 320 aaKnown RBP eCLIP8.3□□□□□ -1.08
TFF3-202ENST00000398431 RPL29P47914 159 aaKnown RBP8.3□□□□□ -1.08
TFF3-202ENST00000398431 RAB24Q969Q5 203 aa8.3□□□□□ -1.08
TFF3-202ENST00000398431 C20orf144Q9BQM9 153 aa8.3□□□□□ -1.08
TFF3-202ENST00000398431 PXMP4Q9Y6I8 212 aa8.3□□□□□ -1.08
TFF3-202ENST00000398431 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 A0A1W2PPQ1 181 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GAGE12BA1L429 117 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GAGE7O76087 117 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GAGE12FP0CL80 117 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GAGE12GP0CL81 117 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GAGE12IP0CL82 117 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 ADIRFQ15847 76 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 MIC13Q5XKP0 118 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 KCNIP4Q6PIL6 250 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 OR10J6PQ8NGY7 276 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 TMEM37Q8WXS4 190 aa8.29□□□□□ -1.08
TFF3-202ENST00000398431 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
TFF3-202ENST00000398431 H3BNG1 76 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 H3BTX0 84 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 SLC17A3O00476 420 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 CXorf1O96002 111 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 NDUFA6P56556 154 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
TFF3-202ENST00000398431 LINC00305Q7Z4B0 112 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 VSIG2Q96IQ7 327 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 ZNF586Q9NXT0 402 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 URGCP-MRPS24S4R325 110 aa8.28□□□□□ -1.08
TFF3-202ENST00000398431 A0A096LPF7 62 aa8.27□□□□□ -1.09
TFF3-202ENST00000398431 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
TFF3-202ENST00000398431 PAGE4O60829 102 aa8.27□□□□□ -1.09
TFF3-202ENST00000398431 IGLC2P0DOY2 106 aa8.27□□□□□ -1.09
TFF3-202ENST00000398431 SLC50A1Q9BRV3 221 aa8.27□□□□□ -1.09
TFF3-202ENST00000398431 CXCL1P09341 107 aa8.26□□□□□ -1.09
TFF3-202ENST00000398431 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
TFF3-202ENST00000398431 GCSAMLQ5JQS6 135 aa8.26□□□□□ -1.09
TFF3-202ENST00000398431 CST9LP1Q5W188 147 aa8.26□□□□□ -1.09
TFF3-202ENST00000398431 Q6ZTI0 123 aa8.26□□□□□ -1.09
TFF3-202ENST00000398431 PARLQ9H300 379 aa8.26□□□□□ -1.09
TFF3-202ENST00000398431 HERC1Q15751 4861 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 TRAV5A0A0B4J249 113 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 J3KRW8 73 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
TFF3-202ENST00000398431 XGP55808 180 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 LINC00315P59091 139 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 RPL23P62829 140 aaKnown RBP8.25□□□□□ -1.09
TFF3-202ENST00000398431 RPL19P84098 196 aaKnown RBP8.25□□□□□ -1.09
TFF3-202ENST00000398431 S100A7AQ86SG5 101 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 BPIFA4PQ86YQ2 179 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 NIT2Q9NQR4 276 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
TFF3-202ENST00000398431 SNURFLB1AK76 121 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 NPIPB6E9PJ23 425 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
TFF3-202ENST00000398431 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 TRGC2P03986 189 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 STAG3L2P0CL84 134 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 STAG3L3P0CL85 134 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 TAS2R45P59539 299 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 C18orf15Q96N68 181 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 ODF3Q96PU9 254 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 PFDN5Q99471 154 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 PYGO2Q9BRQ0 406 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 OR51M1Q9H341 326 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 TNFRSF18Q9Y5U5 241 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 ARL2-SNX15V9GYD0 113 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 FAT1Q14517 4588 aa8.24□□□□□ -1.09
TFF3-202ENST00000398431 ZNF324O75467 553 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms