RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CEACAM8P31997 349 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-204ENST00000397545 SYNJ2BPP57105 145 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 C9JAW5 83 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 RITA1Q96K30 269 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
CCDC40-204ENST00000397545 TP53TG1Q9Y2A0 90 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 LINC01559Q495D7 138 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 DTX2Q86UW9 622 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 C9orf118A6NHY6 69 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 C22orf46C9J442 243 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 CCL25O15444 150 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 SPINK13Q1W4C9 94 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 NCOR1P1Q9H4R4 102 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 CFAP47Q6ZTR5 3102 aa8.51□□□□□ -1.05
CCDC40-204ENST00000397545 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 H3BRN7 92 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 NDUFS8O00217 210 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 E7EUB6 86 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 THAP8Q8NA92 274 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 MRPL36Q9P0J6 103 aaKnown RBP8.5□□□□□ -1.05
CCDC40-204ENST00000397545 TSSC4Q9Y5U2 329 aaPredicted RBP8.5□□□□□ -1.05
CCDC40-204ENST00000397545 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 H3BMG7 143 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 EGR2P11161 476 aaPredicted RBP8.5□□□□□ -1.05
CCDC40-204ENST00000397545 ODF3L1Q8IXM7 274 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 MSRB1Q9NZV6 116 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 CENPEQ02224 2701 aa8.5□□□□□ -1.05
CCDC40-204ENST00000397545 TRAV12-2A0A075B6T6 113 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 TRAV8-4A0A0B4J246 113 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
CCDC40-204ENST00000397545 LINC00158P58513 81 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 TTTY13Q9BZ97 58 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 KLK9Q9UKQ9 250 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 DMXL1Q9Y485 3027 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 K7EMI3 77 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 F6UB75 175 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 PROP1O75360 226 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 SPINK8P0C7L1 97 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 ANXA2RQ3ZCQ2 193 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 SRSF8Q9BRL6 282 aaKnown RBP8.49□□□□□ -1.05
CCDC40-204ENST00000397545 DKK4Q9UBT3 224 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 LTAP01374 205 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 GAGE1Q13065 139 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 MSMPQ1L6U9 139 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 UTF1Q5T230 341 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
CCDC40-204ENST00000397545 DAZ1Q9NQZ3 744 aaKnown RBP8.49□□□□□ -1.05
CCDC40-204ENST00000397545 TRAV8-3A0A0A6YYJ7 113 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 DEFB131AP59861 70 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 Q8N8P6 123 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 PRADC1Q9BSG0 188 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 LAMA5O15230 3695 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 DYNAPQ8N1N2 210 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 FAM167A-AS1Q96KT0 104 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
CCDC40-204ENST00000397545 COL27A1Q8IZC6 1860 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-204ENST00000397545 FAM110DQ8TAY7 271 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-204ENST00000397545 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 PLEKHB2Q96CS7 222 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 KMT2EQ8IZD2 1858 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 ZFAND6Q6FIF0 208 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 FOXE3Q13461 319 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 RNASE8Q8TDE3 154 aaKnown RBP8.47□□□□□ -1.05
CCDC40-204ENST00000397545 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
CCDC40-204ENST00000397545 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.05
CCDC40-204ENST00000397545 PAX4O43316 350 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 UBE2E1P51965 193 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 ATXN8Q156A1 80 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 GTSF1Q8WW33 167 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 YAE1D1Q9NRH1 226 aa8.46□□□□□ -1.05
CCDC40-204ENST00000397545 A0A1W2PPM0 123 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 B4DSR2 109 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 LHBP01229 141 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 GATD1Q8NB37 220 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 USMG5Q96IX5 58 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 BRWD1-AS2P59051 145 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 IGFL3Q6UXB1 125 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 PRIMA1Q86XR5 153 aa8.46□□□□□ -1.06
CCDC40-204ENST00000397545 K7EP34 96 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms