RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ZFP30Q9Y2G7 519 aa14.99□□□□□ -0.01
TSPAN4-206ENST00000397408 ALMS1Q8TCU4 4167 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 TRGV1A0A0A0MS02 117 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 ATP5G1P05496 136 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 TCTAP57738 103 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 BLOC1S1P78537 153 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 C11orf21Q9P2W6 132 aa14.98□□□□□ -0.01
TSPAN4-206ENST00000397408 GNRH2O43555 120 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 SPINK4O60575 86 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 LTAP01374 205 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 TYMSP04818 313 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 BCL2P10415 239 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 ZC2HC1AQ96GY0 325 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 KCNS1Q96KK3 526 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 TXNDC17Q9BRA2 123 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 APLNQ9ULZ1 77 aa14.97□□□□□ -0.01
TSPAN4-206ENST00000397408 F5H768 121 aa14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 S100A9P06702 114 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 MEF2BQ02080 365 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 LINC00476Q8WZB0 136 aa14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 C11orf52Q96A22 123 aa14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 MRPL16Q9NX20 251 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-206ENST00000397408 SACSQ9NZJ4 4579 aa14.95□□□□□ -0.02
TSPAN4-206ENST00000397408 IGHV3-16A0A0C4DH30 117 aa14.95□□□□□ -0.02
TSPAN4-206ENST00000397408 COX8CQ7Z4L0 72 aa14.95□□□□□ -0.02
TSPAN4-206ENST00000397408 NDUFAF3Q9BU61 184 aa14.95□□□□□ -0.02
TSPAN4-206ENST00000397408 TRGV2A0A075B6R0 118 aa14.94□□□□□ -0.02
TSPAN4-206ENST00000397408 TMEM88Q6PEY1 159 aa14.94□□□□□ -0.02
TSPAN4-206ENST00000397408 NHLRC2Q8NBF2 726 aa14.94□□□□□ -0.02
TSPAN4-206ENST00000397408 FAM210BQ96KR6 192 aa14.94□□□□□ -0.02
TSPAN4-206ENST00000397408 FABP5P3A8MUU1 101 aa14.93□□□□□ -0.02
TSPAN4-206ENST00000397408 LGALS9BQ3B8N2 356 aa14.93□□□□□ -0.02
TSPAN4-206ENST00000397408 VAX2Q9UIW0 290 aa14.93□□□□□ -0.02
TSPAN4-206ENST00000397408 LY6G6CO95867 125 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 TAGLN2P37802 199 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 RPL35P42766 123 aaKnown RBP14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 CRIP1P50238 77 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 SPXQ9BT56 116 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 DERL1Q9BUN8 251 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 DNAH1Q9P2D7 4330 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 PDE6DO43924 150 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 SH2D1AO60880 128 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 FAM162BQ5T6X4 162 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 BAGE2Q86Y30 109 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 LYPD6BQ8NI32 183 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 C18orf15Q96N68 181 aa14.92□□□□□ -0.02
TSPAN4-206ENST00000397408 IGKV3D-20A0A0C4DH25 116 aa14.91□□□□□ -0.02
TSPAN4-206ENST00000397408 RYR2Q92736 4967 aa14.9□□□□□ -0.02
TSPAN4-206ENST00000397408 ORM1P02763 201 aa14.9□□□□□ -0.02
TSPAN4-206ENST00000397408 ZNF674Q2M3X9 581 aa14.9□□□□□ -0.02
TSPAN4-206ENST00000397408 MUC4Q99102 2169 aa14.9□□□□□ -0.02
TSPAN4-206ENST00000397408 RYR3Q15413 4870 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 M0R036 132 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 M0R2P5 195 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 HOXA5P20719 270 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 OR5I1Q13606 314 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 LGALS9CQ6DKI2 356 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 MLST8Q9BVC4 326 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 MED9Q9NWA0 146 aa14.89□□□□□ -0.03
TSPAN4-206ENST00000397408 B4DEV8 164 aa14.88□□□□□ -0.03
TSPAN4-206ENST00000397408 IGHV3-53P01767 116 aa14.88□□□□□ -0.03
TSPAN4-206ENST00000397408 CENPWQ5EE01 88 aa14.88□□□□□ -0.03
TSPAN4-206ENST00000397408 TEX261Q6UWH6 196 aa14.88□□□□□ -0.03
TSPAN4-206ENST00000397408 RASL10AQ92737 203 aa14.88□□□□□ -0.03
TSPAN4-206ENST00000397408 C9orf85Q96MD7 179 aa14.87□□□□□ -0.03
TSPAN4-206ENST00000397408 RBFOX3A6NFN3 312 aa14.86□□□□□ -0.03
TSPAN4-206ENST00000397408 RNASE3P12724 160 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-206ENST00000397408 S100A4P26447 101 aaKnown RBP14.86□□□□□ -0.03
TSPAN4-206ENST00000397408 ASIPP42127 132 aa14.86□□□□□ -0.03
TSPAN4-206ENST00000397408 C15orf53Q8NAA6 179 aa14.86□□□□□ -0.03
TSPAN4-206ENST00000397408 TRAV26-1A0A087WT03 109 aa14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 RAB19A4D1S5 217 aa14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 KRBOX1C9JBD0 128 aa14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 LINC01559Q495D7 138 aa14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 PRR27Q6MZM9 219 aa14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 PCNPQ8WW12 178 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-206ENST00000397408 TMSB15BA0A087X1C1 80 aa14.84□□□□□ -0.03
TSPAN4-206ENST00000397408 A0A0J9YY99 117 aa14.84□□□□□ -0.03
TSPAN4-206ENST00000397408 GNG4P50150 75 aa14.84□□□□□ -0.03
TSPAN4-206ENST00000397408 TOR2AQ5JU69 321 aa14.84□□□□□ -0.03
TSPAN4-206ENST00000397408 ZNF506Q5JVG8 444 aa14.84□□□□□ -0.03
TSPAN4-206ENST00000397408 GRIFINA4D1Z8 144 aa14.83□□□□□ -0.03
TSPAN4-206ENST00000397408 C9JCJ5 164 aa14.83□□□□□ -0.03
TSPAN4-206ENST00000397408 NUDT3O95989 172 aa14.83□□□□□ -0.03
TSPAN4-206ENST00000397408 TRBV20OR9-2A0A075B6H5 130 aa14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 H3BVH4 76 aa14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 IGLV2-8P01709 118 aa14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 SFTA3P0C7M3 94 aa14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 MGST1P10620 155 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 ZNF876PQ49A33 203 aa14.83□□□□□ -0.04
TSPAN4-206ENST00000397408 P0DMU3 169 aa14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 FAM231AP0DMU4 169 aa14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 FAM231CP0DMU5 169 aa14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 ZNF479Q96JC4 524 aa14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 EIF5A2Q9GZV4 153 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 IL36BQ9NZH7 164 aa14.82□□□□□ -0.04
TSPAN4-206ENST00000397408 HYDINQ4G0P3 5121 aa14.81□□□□□ -0.04
TSPAN4-206ENST00000397408 TRAV4A0A0B4J268 109 aa14.81□□□□□ -0.04
TSPAN4-206ENST00000397408 PGPEP1LA6NFU8 196 aa14.81□□□□□ -0.04
TSPAN4-206ENST00000397408 TMEM250H0YL14 139 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms