RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 NOTCH3Q9UM47 2321 aa14.01□□□□□ -0.17
TSPAN4-204ENST00000397404 IGKV3D-20A0A0C4DH25 116 aa14□□□□□ -0.17
TSPAN4-204ENST00000397404 M0R2Z0 102 aa14□□□□□ -0.17
TSPAN4-204ENST00000397404 CTRLP40313 264 aa14□□□□□ -0.17
TSPAN4-204ENST00000397404 FER1L6-AS1Q8NA97 138 aa14□□□□□ -0.17
TSPAN4-204ENST00000397404 TGIF2-C20orf24A0A0A6YYL0 155 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 A0A1B0GUT8 65 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 OR5AL1P0C617 328 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 IGLC6P0CF74 106 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 ASIPP42127 132 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 RIGQ13278 110 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 LURAP1LQ8IV03 231 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 GTSF1Q8WW33 167 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 TRGV11A0A075B6L2 103 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 TRAV12-3A0A0B4J271 114 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 SSBP4Q9BWG4 385 aaPredicted RBP13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 GNB1LQ9BYB4 327 aa13.99□□□□□ -0.17
TSPAN4-204ENST00000397404 IGHV1OR15-1A0A075B7D0 117 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 KIR2DL5BA0A0G2JN68 375 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 KIR2DL5BA0A0G2JPC4 375 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 J3KRW8 73 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 CRXO43186 299 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 TCL1AP56279 114 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 CACNG7P62955 275 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 HBBP68871 147 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 ZNF124Q15973 351 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 KRTAP21-3Q3LHN1 58 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 KIR2DL5AQ8N109 375 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 KIR2DL5BQ8NHK3 375 aa13.98□□□□□ -0.17
TSPAN4-204ENST00000397404 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 SNAI2O43623 268 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 HLA-DQA1P01909 254 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 S100A4P26447 101 aaKnown RBP13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 ANXA2RQ3ZCQ2 193 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 SPATA3Q8NHX4 192 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 C11orf21Q9P2W6 132 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 TP53TG3Q9ULZ0 132 aa13.97□□□□□ -0.17
TSPAN4-204ENST00000397404 AGRNO00468 2067 aa13.96□□□□□ -0.17
TSPAN4-204ENST00000397404 RPS10P46783 165 aaKnown RBP13.96□□□□□ -0.17
TSPAN4-204ENST00000397404 NAGKQ9UJ70 344 aa13.96□□□□□ -0.17
TSPAN4-204ENST00000397404 TRAV12-2A0A075B6T6 113 aa13.95□□□□□ -0.18
TSPAN4-204ENST00000397404 TMSB15BA0A087X1C1 80 aa13.95□□□□□ -0.18
TSPAN4-204ENST00000397404 PGLYRP4Q96LB8 373 aa13.95□□□□□ -0.18
TSPAN4-204ENST00000397404 GOLT1BQ9Y3E0 138 aa13.95□□□□□ -0.18
TSPAN4-204ENST00000397404 IGHV4-4A0A075B6R2 117 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 A0A1B0GXF2 115 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 APOC4P55056 127 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 LYZL1Q6UWQ5 148 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 Q8N1Y9 231 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 DEFB125Q8N687 156 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 CSTL1Q9H114 145 aa13.94□□□□□ -0.18
TSPAN4-204ENST00000397404 LOC102724200A0A096LPH7 203 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 A8MZ25 164 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 GZMBP10144 247 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 KIR3DS1Q14943 382 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 PIK3CD-AS1Q5SR53 167 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 ZNF575Q86XF7 245 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 GATD1Q8NB37 220 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 SCRT2Q9NQ03 307 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 C1orf196B1AJZ1 125 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 UBE2CO00762 179 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 MDFIQ99750 246 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 NDUFAF3Q9BU61 184 aa13.93□□□□□ -0.18
TSPAN4-204ENST00000397404 MRPL54Q6P161 138 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 ZNF493Q6ZR52 646 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 SMIM15Q7Z3B0 74 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 TMEM208Q9BTX3 173 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 TPPP3Q9BW30 176 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 XCL2Q9UBD3 114 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 PHLDA3Q9Y5J5 127 aa13.92□□□□□ -0.18
TSPAN4-204ENST00000397404 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 ARMS2P0C7Q2 107 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 RAB5BP61020 215 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 OXLD1Q5BKU9 147 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 MUC21Q5SSG8 566 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 SAMD5Q5TGI4 173 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 PTH2Q96A98 100 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 LINC01587Q99440 93 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
TSPAN4-204ENST00000397404 CBY3A6NI87 242 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 SNURFLB1AK76 121 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 FXYD7P58549 80 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 SPANXN1Q5VSR9 72 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 SYT8Q8NBV8 401 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 WFDC10AQ9H1F0 79 aa13.9□□□□□ -0.18
TSPAN4-204ENST00000397404 IGHV3-16A0A0C4DH30 117 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 TRGC1P0CF51 173 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 ZNF415Q09FC8 603 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 TMEM136Q6ZRR5 245 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 ZFP82Q8N141 532 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 SPXQ9BT56 116 aa13.89□□□□□ -0.19
TSPAN4-204ENST00000397404 H3BVH4 76 aa13.88□□□□□ -0.19
TSPAN4-204ENST00000397404 NXPH4O95158 308 aa13.88□□□□□ -0.19
TSPAN4-204ENST00000397404 RNASE3P12724 160 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-204ENST00000397404 RPL35AP18077 110 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-204ENST00000397404 TWIST1Q15672 202 aa13.88□□□□□ -0.19
TSPAN4-204ENST00000397404 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms