RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 TIMM17AQ99595 171 aa3.42□□□□□ -1.86
TNFRSF17-202ENST00000396495 LINC00597Q9H2U6 94 aa3.42□□□□□ -1.86
TNFRSF17-202ENST00000396495 LINC00474Q9P2X8 69 aa3.42□□□□□ -1.86
TNFRSF17-202ENST00000396495 CCL26Q9Y258 94 aa3.42□□□□□ -1.86
TNFRSF17-202ENST00000396495 COL4A3Q01955 1670 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 C19orf84I3L1E1 186 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 COX7A2LO14548 114 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 PSPHP1O15172 72 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 IGKV1-5P01602 117 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 RHOHQ15669 191 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 FBXL19-AS1Q494R0 122 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 ASB16-AS1Q495Z4 193 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 LY6G5CQ5SRR4 150 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 LYZL2Q7Z4W2 148 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 VMO1Q7Z5L0 202 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 MDP1Q86V88 176 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 ZNF491Q8N8L2 437 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 FXYD5Q96DB9 178 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 GFRA4Q9GZZ7 299 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 SLC25A22Q9H936 323 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 KIAA1549LQ6ZVL6 1849 aa3.41□□□□□ -1.86
TNFRSF17-202ENST00000396495 IGKV1D-17A0A075B6S4 117 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGKV1D-8A0A087WSZ0 117 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGKV2D-26A0A0A0MRZ7 120 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGLV3-32A0A0A0MS00 114 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGKV1-9A0A0C4DH69 117 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 LOC107984156A0A0G2JMH3 177 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 TRBV10-3A0A0K0K1G6 114 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 EPOPA6NHQ4 379 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IQCF6A8MYZ5 107 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 LOC730098B7Z3J9 87 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGLV2-8P01709 118 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 HMGN2P05204 90 aaKnown RBP3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 MGST1P10620 155 aaKnown RBP3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 RNASE4P34096 147 aaKnown RBP3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 FOLR3P41439 243 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 ESRGQ1W209 222 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 C22orf34Q6ZV56 151 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 ARL17AQ8IVW1 177 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 COX14Q96I36 57 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 PRR25Q96S07 402 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 ESM1Q9NQ30 184 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 AGRNO00468 2067 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 CHD9Q3L8U1 2897 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 TRANK1O15050 2925 aa3.4□□□□□ -1.87
TNFRSF17-202ENST00000396495 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 TMSB15BA0A087X1C1 80 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 BUB1B-PAK6H3BSN5 160 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 H3BVH4 76 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 ERC2-IT1O76042 136 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 NXPH3O95157 252 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 TRBV12-3P01733 135 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 CRIP2P52943 208 aaPredicted RBP3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 B3GALT5-AS1P59052 145 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 Q0VFX4 171 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 NSUN5P1Q3KNT7 163 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 GPHB5Q86YW7 130 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 SPTSSAQ969W0 71 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 DEC1Q9P2X7 70 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 U3KQK5 164 aa3.39□□□□□ -1.87
TNFRSF17-202ENST00000396495 PHF3Q92576 2039 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 LOC389332A0A1B0GUA5 103 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1BA6NDE4 496 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1EA6NEQ0 496 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 FAM223BA6NKX1 122 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 H7C423 109 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGHV3-33P01772 117 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1DP0C7P1 496 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1A1P0DJD3 496 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1CP0DJD4 496 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 LMO4P61968 165 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 TWIST1Q15672 202 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 MRPL51Q4U2R6 128 aaKnown RBP3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 C2orf82Q6UX34 121 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 IGFL3Q6UXB1 125 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 NUP37Q8NFH4 326 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 CCL4L1Q8NHW4 92 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 Q96M85 177 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 PRO1854Q9UHT4 67 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 LHFPL6Q9Y693 200 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 POLEQ07864 2286 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 COL4A2P08572 1712 aa3.38□□□□□ -1.87
TNFRSF17-202ENST00000396495 NUP214P35658 2090 aaPredicted RBP3.37□□□□□ -1.87
TNFRSF17-202ENST00000396495 DOCK11Q5JSL3 2073 aa3.37□□□□□ -1.87
TNFRSF17-202ENST00000396495 MYOFQ9NZM1 2061 aa3.37□□□□□ -1.87
TNFRSF17-202ENST00000396495 LRP4O75096 1905 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms