RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 IMMP2LQ96T52 175 aa8.43□□□□□ -1.06
RTN1-203ENST00000395090 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
RTN1-203ENST00000395090 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
RTN1-203ENST00000395090 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 H7BYZ3 331 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 DUSP14O95147 198 aaKnown RBP8.42□□□□□ -1.06
RTN1-203ENST00000395090 EBLN2Q6P2I7 272 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 ZFAND2AQ8N6M9 145 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 KRTAP9-9Q9BYP9 154 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 KRTAP9-4Q9BYQ2 154 aa8.42□□□□□ -1.06
RTN1-203ENST00000395090 H3BMM0 161 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 PFN1P07737 140 aaKnown RBP8.41□□□□□ -1.06
RTN1-203ENST00000395090 HLA-DRB4P13762 266 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 ZNF80P51504 273 aaPredicted RBP8.41□□□□□ -1.06
RTN1-203ENST00000395090 AKR1D1P51857 326 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 PRR27Q6MZM9 219 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 HLA-DRB4X5D2U9 266 aa8.41□□□□□ -1.06
RTN1-203ENST00000395090 FABP5P3A8MUU1 101 aa8.4□□□□□ -1.06
RTN1-203ENST00000395090 KLLNB2CW77 178 aa8.4□□□□□ -1.06
RTN1-203ENST00000395090 FAM162BQ5T6X4 162 aa8.4□□□□□ -1.06
RTN1-203ENST00000395090 AMTNQ6UX39 209 aa8.4□□□□□ -1.06
RTN1-203ENST00000395090 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.06
RTN1-203ENST00000395090 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.07
RTN1-203ENST00000395090 OR11H12B2RN74 326 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.07
RTN1-203ENST00000395090 P01737 135 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 S100A8P05109 93 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 SMIM6P0DI80 62 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 ZNF575Q86XF7 245 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 C12orf57Q99622 126 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 IL36BQ9NZH7 164 aa8.4□□□□□ -1.07
RTN1-203ENST00000395090 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
RTN1-203ENST00000395090 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
RTN1-203ENST00000395090 SH2D1AO60880 128 aa8.39□□□□□ -1.07
RTN1-203ENST00000395090 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
RTN1-203ENST00000395090 ELOBQ15370 118 aa8.39□□□□□ -1.07
RTN1-203ENST00000395090 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
RTN1-203ENST00000395090 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
RTN1-203ENST00000395090 S100A6P06703 90 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 GPX1P07203 203 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 CD7P09564 240 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 LEPP41159 167 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 PRR9Q5T870 116 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 Q6AWC8 147 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 LURAP1LQ8IV03 231 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 TSKUQ8WUA8 353 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 PYGO2Q9BRQ0 406 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 AGRNO00468 2067 aa8.38□□□□□ -1.07
RTN1-203ENST00000395090 FAM231BA6NCW3 169 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 A8MWL6 223 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 IGLL1P15814 213 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 TSPOP30536 169 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
RTN1-203ENST00000395090 GFRA4Q9GZZ7 299 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 URGCP-MRPS24S4R325 110 aa8.37□□□□□ -1.07
RTN1-203ENST00000395090 TRRAPQ9Y4A5 3859 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 TRAV9-1A0A075B6T8 112 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 CA1P00915 261 aaPredicted RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 S100PP25815 95 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 CDKN1BP46527 198 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 S100A12P80511 92 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 FABP9Q0Z7S8 132 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 KCNIP4Q6PIL6 250 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 OR2D3Q8NGH3 330 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 TRAV21A0A0B4J279 112 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 TMEM189A5PLL7 270 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 ZNF324O75467 553 aaPredicted RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 IGKV3-20P01619 116 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 CXCL1P09341 107 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
RTN1-203ENST00000395090 FHL2Q14192 279 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 Q6ZQT7 251 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
RTN1-203ENST00000395090 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
RTN1-203ENST00000395090 CRXO43186 299 aaPredicted RBP8.35□□□□□ -1.07
RTN1-203ENST00000395090 RPS20P60866 119 aaKnown RBP8.35□□□□□ -1.07
RTN1-203ENST00000395090 RPL19P84098 196 aaKnown RBP8.35□□□□□ -1.07
RTN1-203ENST00000395090 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
RTN1-203ENST00000395090 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
RTN1-203ENST00000395090 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 XKRY2A2RUG3 117 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 C7orf71A4D174 169 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 M0R2Z0 102 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 ORM1P02763 201 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 RPS10P46783 165 aaKnown RBP8.34□□□□□ -1.07
RTN1-203ENST00000395090 SPINK13Q1W4C9 94 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 STHQ8IWL8 128 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 NUP35Q8NFH5 326 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 BTF3L4Q96K17 158 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 NAT8BQ9UHF3 227 aa8.34□□□□□ -1.07
RTN1-203ENST00000395090 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms