RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RNASE3P12724 160 aaKnown RBP11.56□□□□□ -0.56
CPSF7-202ENST00000394888 ODF1Q14990 250 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 USMG5Q96IX5 58 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 TMEM78Q5T7P6 136 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 WFDC3Q8IUB2 231 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 MYO18BQ8IUG5 2567 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 SLC25A34Q6PIV7 304 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 POLQO75417 2590 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 PDZD2O15018 2839 aa11.56□□□□□ -0.56
CPSF7-202ENST00000394888 IGKV2D-26A0A0A0MRZ7 120 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 CD5LO43866 347 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 PRB1P04280 392 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 LINC00315P59091 139 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 CBY3A6NI87 242 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 IGHV4-59P01825 116 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 S100A7P31151 101 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
CPSF7-202ENST00000394888 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 PPBPP02775 128 aa11.55□□□□□ -0.56
CPSF7-202ENST00000394888 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 MYOZ3Q8TDC0 251 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 KIF25-AS1Q9Y6Z4 181 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 NXPH4O95158 308 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 FCER1GP30273 86 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 DEFB112Q30KQ8 113 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 Q8N8P6 123 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 OR2K2Q8NGT1 345 aa11.54□□□□□ -0.56
CPSF7-202ENST00000394888 NIPBLQ6KC79 2804 aaeCLIP11.54□□□□□ -0.56
CPSF7-202ENST00000394888 KLLNB2CW77 178 aa11.53□□□□□ -0.56
CPSF7-202ENST00000394888 H3BVH4 76 aa11.53□□□□□ -0.56
CPSF7-202ENST00000394888 RASL10AQ92737 203 aa11.53□□□□□ -0.56
CPSF7-202ENST00000394888 NUDT3O95989 172 aa11.53□□□□□ -0.56
CPSF7-202ENST00000394888 LEPP41159 167 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 KRTAP10-9P60411 292 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 PCP2Q8IVA1 136 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 ZNF738Q8NE65 137 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 MAP1LC3AQ9H492 121 aa11.52□□□□□ -0.56
CPSF7-202ENST00000394888 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
CPSF7-202ENST00000394888 B4DSR2 109 aa11.52□□□□□ -0.57
CPSF7-202ENST00000394888 SMPXQ9UHP9 88 aa11.52□□□□□ -0.57
CPSF7-202ENST00000394888 AGRNO00468 2067 aa11.52□□□□□ -0.57
CPSF7-202ENST00000394888 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
CPSF7-202ENST00000394888 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 ZNF462Q96JM2 2506 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 ANXA2RQ3ZCQ2 193 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 GNRH2O43555 120 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 KRTAP1-3Q8IUG1 177 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 C18orf15Q96N68 181 aa11.51□□□□□ -0.57
CPSF7-202ENST00000394888 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 MAPK1IP1LQ8NDC0 245 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 PF4V1P10720 104 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
CPSF7-202ENST00000394888 NF1P21359 2839 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 SRD5A1P18405 259 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 ERASQ7Z444 233 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 OR1N2Q8NGR9 330 aa11.5□□□□□ -0.57
CPSF7-202ENST00000394888 K7EMT4 169 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 DAZ1Q9NQZ3 744 aaKnown RBP11.49□□□□□ -0.57
CPSF7-202ENST00000394888 OVOL1O14753 267 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 TCTAP57738 103 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 ACACBO00763 2458 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 J3KRW8 73 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
CPSF7-202ENST00000394888 TTTY13Q9BZ97 58 aa11.49□□□□□ -0.57
CPSF7-202ENST00000394888 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
CPSF7-202ENST00000394888 PTTG1IPP53801 180 aa11.48□□□□□ -0.57
CPSF7-202ENST00000394888 ZNF702PQ9H963 129 aa11.48□□□□□ -0.57
CPSF7-202ENST00000394888 PEF1Q9UBV8 284 aaKnown RBP11.48□□□□□ -0.57
CPSF7-202ENST00000394888 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-202ENST00000394888 MED14OSP0DP75 135 aa11.47□□□□□ -0.57
CPSF7-202ENST00000394888 UBE2V1Q13404 147 aa11.47□□□□□ -0.57
CPSF7-202ENST00000394888 NACAE9PAV3 2078 aa11.47□□□□□ -0.57
CPSF7-202ENST00000394888 GATA3P23771 443 aa11.46□□□□□ -0.57
CPSF7-202ENST00000394888 SMIM17P0DL12 118 aa11.46□□□□□ -0.58
CPSF7-202ENST00000394888 RNASE4P34096 147 aaKnown RBP11.46□□□□□ -0.58
CPSF7-202ENST00000394888 RNF152Q8N8N0 203 aa11.46□□□□□ -0.58
CPSF7-202ENST00000394888 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.58
CPSF7-202ENST00000394888 MRAP2Q96G30 205 aa11.46□□□□□ -0.58
CPSF7-202ENST00000394888 TRAV8-6A0A0B4J262 113 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 JMJD8Q96S16 334 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 IGHV4-31P0DP07 118 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 JPT2Q9H910 190 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
CPSF7-202ENST00000394888 IGKV3-7A0A075B6H7 116 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 SLC25A16P16260 332 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 LAGE3Q14657 143 aa11.44□□□□□ -0.58
CPSF7-202ENST00000394888 MORN3Q6PF18 240 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms