RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 LGALS9CQ6DKI2 356 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 C9orf47Q6ZRZ4 202 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 FANCD2OSQ96PS1 177 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 GTSF1LQ9H1H1 148 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 KAAG1Q9UBP8 84 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 KIF26AQ9ULI4 1882 aaPredicted RBP5.94□□□□□ -1.46
SYNE2-205ENST00000394768 WFDC9Q8NEX5 89 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 PTPN13Q12923 2485 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 CEP192Q8TEP8 1941 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 Q5BKY6 102 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 LINC00473A8K010 186 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 IGKV1-16P04430 117 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
SYNE2-205ENST00000394768 RUSC1-AS1Q66K80 236 aa5.94□□□□□ -1.46
SYNE2-205ENST00000394768 IGHV3-16A0A0C4DH30 117 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 hDV102S1A0JD36 115 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 GP9P14770 177 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 PINLYPA6NC86 204 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 ZFP2Q6ZN57 461 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 NREPQ16612 68 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 HCFC1P51610 2035 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 C3orf79P0CE67 100 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 LY6G6FQ5SQ64 297 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 C17orf82Q86X59 251 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-205ENST00000394768 NTF4P34130 210 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 Q9HAA7 133 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 LYL1P12980 280 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 CSRP3P50461 194 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 C17orf77Q96MU5 243 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 MORN5Q5VZ52 161 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 CASC2Q6XLA1 102 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 CEND1Q8N111 149 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 TIMM17AQ99595 171 aa5.93□□□□□ -1.46
SYNE2-205ENST00000394768 NCOA6Q14686 2063 aaPredicted RBP5.93□□□□□ -1.46
SYNE2-205ENST00000394768 A8MWP6 167 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 DEFB113Q30KQ7 82 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 ARHGAP21Q5T5U3 1957 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 ATOX1O00244 68 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 WIPF2Q8TF74 440 aaPredicted RBP5.92□□□□□ -1.46
SYNE2-205ENST00000394768 ANKHD1Q8IWZ3 2542 aaKnown RBP5.92□□□□□ -1.46
SYNE2-205ENST00000394768 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 ATP6V0E2Q8NHE4 81 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 PIFOQ8TCI5 191 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 C20orf144Q9BQM9 153 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 CACNA1AO00555 2505 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 IGKV1-27A0A075B6S5 117 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 DEFB105AQ8NG35 78 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 KNCNA6PVL3 124 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 FLVCR1-AS1Q8TAF5 88 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 SMAD5-AS1Q9Y6J3 95 aa5.92□□□□□ -1.46
SYNE2-205ENST00000394768 PNRC2Q9NPJ4 139 aaKnown RBP5.92□□□□□ -1.46
SYNE2-205ENST00000394768 TRAV3A0A0B4J244 114 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 ETV2O00321 342 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-205ENST00000394768 LYPD2Q6UXB3 125 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 K7EM74 188 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 DENND4CQ5VZ89 1909 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 GYPEP15421 78 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 COX8AP10176 69 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 PRR14LQ5THK1 2151 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 FOXL2NBQ6ZUU3 175 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 SMIM27A0A1W2PRY6 76 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 TMEM89A2RUT3 159 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 PYY3Q5JQD4 70 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 F8W735 103 aaPredicted RBP5.91□□□□□ -1.46
SYNE2-205ENST00000394768 C8orf49Q96NF6 230 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 DOPEY1Q5JWR5 2465 aa5.91□□□□□ -1.46
SYNE2-205ENST00000394768 TMEM256-PLSCR3K7ERE1 68 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 IGHV2-5P01817 119 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 WFDC1Q9HC57 220 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 MUSTN1Q8IVN3 82 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 Q9H8V8 135 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 SIPA1L1O43166 1804 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 CCL25O15444 150 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 MRPL51Q4U2R6 128 aaKnown RBP5.9□□□□□ -1.46
SYNE2-205ENST00000394768 FGFBP3Q8TAT2 258 aa5.9□□□□□ -1.46
SYNE2-205ENST00000394768 TRAV12-2A0A075B6T6 113 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 IGHV2-70P01814 119 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 DEFB125Q8N687 156 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 CSPG4Q6UVK1 2322 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 DYNAPQ8N1N2 210 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 U3KQE9 123 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 CRYBA4P53673 196 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 KIAA1549Q9HCM3 1950 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 TRBV7-3A0A075B6L6 115 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 COX7B2Q8TF08 81 aa5.9□□□□□ -1.47
SYNE2-205ENST00000394768 TANC2Q9HCD6 1990 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 HIST2H2BCQ6DN03 193 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 VOPP1Q96AW1 172 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 C2orf16Q68DN1 1984 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 BAALC-AS2P0C853 105 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 C18orf32Q8TCD1 76 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms