RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FXYD2P54710 66 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 TMEM78Q5T7P6 136 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 GTSCR1Q86UQ5 136 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 MEGF9Q9H1U4 602 aa14.05□□□□□ -0.16
PCDHA1-202ENST00000394633 TRAV26-2A0A0B4J265 109 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 DPM2O94777 84 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 SMIM17P0DL12 118 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 GCSHP23434 173 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 C8orf86Q6ZUL3 223 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 NRGNQ92686 78 aa14.04□□□□□ -0.16
PCDHA1-202ENST00000394633 UBE2E1P51965 193 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 ANKRD17O75179 2603 aaKnown RBP14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 PRSS47A8MTI9 375 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 ZC2HC1BQ5TFG8 222 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 SMIM15Q7Z3B0 74 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 EEF1AKMT3Q96AZ1 226 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 MRPL53Q96EL3 112 aaKnown RBP14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 SMPXQ9UHP9 88 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 SPCS1Q9Y6A9 102 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
PCDHA1-202ENST00000394633 SMIM13P0DJ93 91 aa14.02□□□□□ -0.16
PCDHA1-202ENST00000394633 SAA4P35542 130 aa14.02□□□□□ -0.16
PCDHA1-202ENST00000394633 C9orf47Q6ZRZ4 202 aa14.02□□□□□ -0.16
PCDHA1-202ENST00000394633 METTL26Q96S19 204 aa14.02□□□□□ -0.16
PCDHA1-202ENST00000394633 UFC1Q9Y3C8 167 aa14.02□□□□□ -0.16
PCDHA1-202ENST00000394633 TRBV25-1A0A075B6N4 114 aa14.02□□□□□ -0.17
PCDHA1-202ENST00000394633 EFNA4P52798 201 aa14.02□□□□□ -0.17
PCDHA1-202ENST00000394633 U3KQE9 123 aa14.02□□□□□ -0.17
PCDHA1-202ENST00000394633 GCN1Q92616 2671 aaKnown RBP14.01□□□□□ -0.17
PCDHA1-202ENST00000394633 LAGE3Q14657 143 aa14.01□□□□□ -0.17
PCDHA1-202ENST00000394633 HIF1ANQ9NWT6 349 aa14.01□□□□□ -0.17
PCDHA1-202ENST00000394633 APCP25054 2843 aa14.01□□□□□ -0.17
PCDHA1-202ENST00000394633 TRAV40A0A0B4J280 105 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 IGHV4-39P01824 125 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 OR5A1Q8NGJ0 315 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 TMEM160Q9NX00 188 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 MRPL35Q9NZE8 188 aaKnown RBP14□□□□□ -0.17
PCDHA1-202ENST00000394633 IGHV4-4A0A075B6R2 117 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 TRBV7-1A0A0A6YYK4 115 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 PRR9Q5T870 116 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 SAMD5Q5TGI4 173 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 NEGR1Q7Z3B1 354 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 CCL19Q99731 98 aa14□□□□□ -0.17
PCDHA1-202ENST00000394633 ABCA2Q9BZC7 2435 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 CENPVL3A0A0U1RRI6 287 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 MYOZ3Q8TDC0 251 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 CSTL1Q9H114 145 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 FABP2P12104 132 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 HLA-DRB4P13762 266 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 SPANXN1Q5VSR9 72 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 HLA-DRB4X5D2U9 266 aa13.99□□□□□ -0.17
PCDHA1-202ENST00000394633 G3V4G9 280 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 H3BVH4 76 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 K7ERJ3 54 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 PHLDA1Q8WV24 401 aaPredicted RBP13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 BPESC1Q9GZL8 116 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 MAPKAPK5-AS1Q8N8E1 139 aa13.98□□□□□ -0.17
PCDHA1-202ENST00000394633 A0A087WX48 190 aa13.97□□□□□ -0.17
PCDHA1-202ENST00000394633 COX6B1P14854 86 aa13.97□□□□□ -0.17
PCDHA1-202ENST00000394633 CEND1Q8N111 149 aa13.97□□□□□ -0.17
PCDHA1-202ENST00000394633 C5orf56Q8N8D9 126 aa13.97□□□□□ -0.17
PCDHA1-202ENST00000394633 C20orf173Q96LM9 149 aa13.97□□□□□ -0.17
PCDHA1-202ENST00000394633 ATP5G2Q06055 141 aa13.96□□□□□ -0.17
PCDHA1-202ENST00000394633 C16orf92Q96LL3 132 aa13.96□□□□□ -0.17
PCDHA1-202ENST00000394633 TM2D2Q9BX73 214 aa13.96□□□□□ -0.17
PCDHA1-202ENST00000394633 NAV2Q8IVL1 2488 aa13.96□□□□□ -0.17
PCDHA1-202ENST00000394633 IGF1P05019 195 aa13.96□□□□□ -0.17
PCDHA1-202ENST00000394633 ZANQ9Y493 2812 aa13.96□□□□□ -0.18
PCDHA1-202ENST00000394633 NPFFO15130 113 aa13.95□□□□□ -0.18
PCDHA1-202ENST00000394633 RIPPLY3P57055 190 aa13.95□□□□□ -0.18
PCDHA1-202ENST00000394633 GLMPQ8WWB7 406 aa13.95□□□□□ -0.18
PCDHA1-202ENST00000394633 NHP2Q9NX24 153 aaKnown RBP13.95□□□□□ -0.18
PCDHA1-202ENST00000394633 MRAP2Q96G30 205 aa13.95□□□□□ -0.18
PCDHA1-202ENST00000394633 K7EMI3 77 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 LMO4P61968 165 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 TMEM219Q86XT9 240 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 SMIM2Q9BVW6 85 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 AGRNO00468 2067 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 J3KRW8 73 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 LINC00527Q9UJ94 153 aa13.94□□□□□ -0.18
PCDHA1-202ENST00000394633 SPRY2O43597 315 aa13.93□□□□□ -0.18
PCDHA1-202ENST00000394633 KRTAP10-9P60411 292 aa13.93□□□□□ -0.18
PCDHA1-202ENST00000394633 C9orf139Q6ZV77 190 aa13.93□□□□□ -0.18
PCDHA1-202ENST00000394633 ZNF469Q96JG9 3925 aaPredicted RBP13.93□□□□□ -0.18
PCDHA1-202ENST00000394633 C19orf54Q5BKX5 351 aa13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 LENEPQ9Y5L5 61 aa13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 FASNP49327 2511 aaKnown RBP13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 TRAV41A0A0B4J266 112 aa13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 PLNP26678 52 aa13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 GPHB5Q86YW7 130 aa13.92□□□□□ -0.18
PCDHA1-202ENST00000394633 J3QKU1 62 aa13.91□□□□□ -0.18
PCDHA1-202ENST00000394633 ATP5J2P56134 94 aa13.91□□□□□ -0.18
PCDHA1-202ENST00000394633 ZFAND2AQ8N6M9 145 aa13.91□□□□□ -0.18
PCDHA1-202ENST00000394633 HIST2H2BCQ6DN03 193 aa13.91□□□□□ -0.18
PCDHA1-202ENST00000394633 TRAV12-1A0A0B4J245 112 aa13.9□□□□□ -0.18
PCDHA1-202ENST00000394633 M0R381 172 aa13.9□□□□□ -0.18
PCDHA1-202ENST00000394633 TAL2Q16559 108 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms