RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RNF183Q96D59 192 aa10.82□□□□□ -0.68
USP49-203ENST00000394253 SHISA3A0PJX4 238 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 FAM27E3Q08E93 113 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 RETNQ9HD89 108 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 TRAV26-1A0A087WT03 109 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 VPREB1P12018 145 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 SRRM5B3KS81 715 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 XCL1P47992 114 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 TMEM200BQ69YZ2 307 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 UPK3BQ9BT76 320 aa10.81□□□□□ -0.68
USP49-203ENST00000394253 C8orf49Q96NF6 230 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 H0Y9J4 135 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 SMIM10L1P0DMW3 83 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 IGLV3-21P80748 117 aaPredicted RBP10.8□□□□□ -0.68
USP49-203ENST00000394253 Q71RC1 249 aaPredicted RBP10.8□□□□□ -0.68
USP49-203ENST00000394253 SMIM10Q96HG1 83 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 LGALS9O00182 355 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 ATP5EP2Q5VTU8 51 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 NDUFS7O75251 213 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 FOXI1Q12951 378 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 C11orf44Q8N8P7 122 aa10.8□□□□□ -0.68
USP49-203ENST00000394253 G3V4G9 280 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 C20orf204Q6ZNR8 217 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 H3BT86 120 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 TIRAPP58753 221 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 ZNRF2Q8NHG8 242 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 TMEM14BQ9NUH8 114 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 PSPNO60542 156 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 E9PQ18 207 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 LTAP01374 205 aa10.79□□□□□ -0.68
USP49-203ENST00000394253 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 ZFP36L1Q07352 338 aaKnown RBP10.78□□□□□ -0.68
USP49-203ENST00000394253 IGHV3-16A0A0C4DH30 117 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 IL9P15248 144 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 SLC25A45Q8N413 288 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 IGHV2-5P01817 119 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 CFHR1Q03591 330 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 B4DSR2 109 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 TIAF1O95411 115 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
USP49-203ENST00000394253 HOXB4P17483 251 aaPredicted RBP10.77□□□□□ -0.68
USP49-203ENST00000394253 PRR31Q5SQ13 230 aa10.77□□□□□ -0.68
USP49-203ENST00000394253 LINC00643Q86TS7 51 aa10.77□□□□□ -0.68
USP49-203ENST00000394253 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.68
USP49-203ENST00000394253 A0A1B0GUS0 222 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 C1orf195Q5TG92 126 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 V9GYV3 84 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 RFPL3SP0C7P2 107 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 CRYGSP22914 178 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 Q6ZS49 121 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 J3QRE1 110 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 C1QCP02747 245 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 RNF152Q8N8N0 203 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 LINC00479Q96M42 142 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 TIMM17AQ99595 171 aa10.77□□□□□ -0.69
USP49-203ENST00000394253 YPEL3P61236 119 aaPredicted RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 CFHR3Q02985 330 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 COL5A3P25940 1745 aaPredicted RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 H3BUX3 64 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 GATA3P23771 443 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 DAZ2Q13117 558 aaKnown RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 LAIR2Q6ISS4 152 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 DAZ4Q86SG3 579 aaKnown RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 PNRC2Q9NPJ4 139 aaKnown RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 DAZ3Q9NR90 486 aaKnown RBP10.76□□□□□ -0.69
USP49-203ENST00000394253 IGHV4-4A0A075B6R2 117 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 IGKV1-9A0A0C4DH69 117 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 SAP25Q8TEE9 199 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 FAM110AQ9BQ89 295 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 PATE3B3GLJ2 98 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 ADCYAP1P18509 176 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
USP49-203ENST00000394253 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
USP49-203ENST00000394253 XCL2Q9UBD3 114 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 IGKV2D-24A0A075B6R9 120 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
USP49-203ENST00000394253 ZMAT4Q9H898 229 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 C5orf67F2Z3F1 127 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 TMEM178BH3BS89 294 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 CLPSL2Q6UWE3 100 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 PRR25Q96S07 402 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 TRBV10-2A0A0K0K1G8 114 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 DEFB131AP59861 70 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 HIST2H2BCQ6DN03 193 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 C17orf77Q96MU5 243 aa10.75□□□□□ -0.69
USP49-203ENST00000394253 IGKV1-39P01597 117 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 IGKV1D-39P04432 117 aa10.74□□□□□ -0.69
USP49-203ENST00000394253 PAQR4Q8N4S7 273 aaPredicted RBP10.74□□□□□ -0.69
USP49-203ENST00000394253 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms