RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CCL24O00175 119 aa16.58■□□□□ 0.24
HMGA2-203ENST00000393578 DNLZQ5SXM8 178 aa16.58■□□□□ 0.24
HMGA2-203ENST00000393578 FAM104BQ5XKR9 115 aa16.58■□□□□ 0.24
HMGA2-203ENST00000393578 OR5AL1P0C617 328 aa16.57■□□□□ 0.24
HMGA2-203ENST00000393578 CD33P20138 364 aa16.57■□□□□ 0.24
HMGA2-203ENST00000393578 DYNLRB2Q8TF09 96 aa16.57■□□□□ 0.24
HMGA2-203ENST00000393578 TMEM191AQ9H0A3 160 aa16.57■□□□□ 0.24
HMGA2-203ENST00000393578 RNF114Q9Y508 228 aa16.57■□□□□ 0.24
HMGA2-203ENST00000393578 ZNF324O75467 553 aaPredicted RBP16.56■□□□□ 0.24
HMGA2-203ENST00000393578 FOSL1P15407 271 aa16.56■□□□□ 0.24
HMGA2-203ENST00000393578 KIR3DS1Q14943 382 aa16.56■□□□□ 0.24
HMGA2-203ENST00000393578 NAGKQ9UJ70 344 aa16.56■□□□□ 0.24
HMGA2-203ENST00000393578 SNAI2O43623 268 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 DUSP14O95147 198 aaKnown RBP16.55■□□□□ 0.24
HMGA2-203ENST00000393578 LEPP41159 167 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 FOXI2Q6ZQN5 318 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 TMEM61Q8N0U2 210 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 MSRB1Q9NZV6 116 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 AMTP48728 403 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 DEFB114Q30KQ6 69 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 AMN1Q8IY45 258 aa16.55■□□□□ 0.24
HMGA2-203ENST00000393578 PROK1P58294 105 aa16.54■□□□□ 0.24
HMGA2-203ENST00000393578 DMRTA1Q5VZB9 504 aa16.54■□□□□ 0.24
HMGA2-203ENST00000393578 NIT1Q86X76 327 aa16.54■□□□□ 0.24
HMGA2-203ENST00000393578 INAFM1C9JVW0 142 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 ANXA2RQ3ZCQ2 193 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 U3KQK5 164 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 IGHV4-4A0A075B6R2 117 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 HSBP1O75506 76 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 PMCHP20382 165 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 CACNG7P62955 275 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 CDPF1Q6NVV7 123 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 RNASEKQ6P5S7 137 aaKnown RBP16.53■□□□□ 0.24
HMGA2-203ENST00000393578 Q6ZWC4 215 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 OR10AG1Q8NH19 301 aa16.53■□□□□ 0.24
HMGA2-203ENST00000393578 MRPL51Q4U2R6 128 aaKnown RBP16.52■□□□□ 0.24
HMGA2-203ENST00000393578 PCP4L1A6NKN8 68 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 H3BVH4 76 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 ASIPP42127 132 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 ORMDL3Q8N138 153 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 CHCHD1Q96BP2 118 aaKnown RBP16.51■□□□□ 0.23
HMGA2-203ENST00000393578 URB1-AS1Q96HZ7 61 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 D6R8Y8 96 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 TSPOP30536 169 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 SIGLEC8Q9NYZ4 499 aa16.51■□□□□ 0.23
HMGA2-203ENST00000393578 C7orf71A4D174 169 aa16.5■□□□□ 0.23
HMGA2-203ENST00000393578 TCF21O43680 179 aa16.5■□□□□ 0.23
HMGA2-203ENST00000393578 MED14OSP0DP75 135 aa16.5■□□□□ 0.23
HMGA2-203ENST00000393578 CD300EQ496F6 205 aaPredicted RBP16.5■□□□□ 0.23
HMGA2-203ENST00000393578 FAM19A2Q8N3H0 131 aa16.5■□□□□ 0.23
HMGA2-203ENST00000393578 SETD2Q9BYW2 2564 aaPredicted RBP16.5■□□□□ 0.23
HMGA2-203ENST00000393578 IGKV3-20P01619 116 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 LINC00614P0C842 121 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 S100A4P26447 101 aaKnown RBP16.49■□□□□ 0.23
HMGA2-203ENST00000393578 CDKN1BP46527 198 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 DEFB131AP59861 70 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 SPANXN1Q5VSR9 72 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 SPAG8Q99932 426 aaPredicted RBP16.49■□□□□ 0.23
HMGA2-203ENST00000393578 TRAV25A0A0B4J276 109 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 FAM159AQ6UWV7 190 aa16.49■□□□□ 0.23
HMGA2-203ENST00000393578 OR4C46A6NHA9 309 aa16.48■□□□□ 0.23
HMGA2-203ENST00000393578 RAB4AP20338 218 aa16.48■□□□□ 0.23
HMGA2-203ENST00000393578 SMIM15Q7Z3B0 74 aa16.48■□□□□ 0.23
HMGA2-203ENST00000393578 RNF185Q96GF1 192 aa16.48■□□□□ 0.23
HMGA2-203ENST00000393578 PRELID3AQ96N28 172 aa16.48■□□□□ 0.23
HMGA2-203ENST00000393578 TRAV12-3A0A0B4J271 114 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 CKS2P33552 79 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 AMTNQ6UX39 209 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 M0R2Z0 102 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 GNRH2O43555 120 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 PPBPP02775 128 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 HLA-DRB4P13762 266 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 SCRT2Q9NQ03 307 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 GSN-AS1Q9NRJ2 163 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 HLA-DRB4X5D2U9 266 aa16.47■□□□□ 0.23
HMGA2-203ENST00000393578 NSD1Q96L73 2696 aaPredicted RBP16.47■□□□□ 0.23
HMGA2-203ENST00000393578 ADARB2-AS1A8MUL3 147 aa16.46■□□□□ 0.23
HMGA2-203ENST00000393578 SCGB1D1O95968 90 aa16.46■□□□□ 0.23
HMGA2-203ENST00000393578 S100A12P80511 92 aa16.46■□□□□ 0.23
HMGA2-203ENST00000393578 TDRG1Q3Y452 100 aa16.46■□□□□ 0.23
HMGA2-203ENST00000393578 TIMM8BQ9Y5J9 83 aaPredicted RBP16.46■□□□□ 0.23
HMGA2-203ENST00000393578 SETXQ7Z333 2677 aaKnown RBP16.46■□□□□ 0.22
HMGA2-203ENST00000393578 A8MTW9 85 aa16.46■□□□□ 0.22
HMGA2-203ENST00000393578 SPINK13Q1W4C9 94 aa16.46■□□□□ 0.22
HMGA2-203ENST00000393578 ZNF256Q9Y2P7 627 aaPredicted RBP16.46■□□□□ 0.22
HMGA2-203ENST00000393578 PHLDA3Q9Y5J5 127 aa16.46■□□□□ 0.22
HMGA2-203ENST00000393578 HIVEP1P15822 2718 aa16.45■□□□□ 0.22
HMGA2-203ENST00000393578 SORL1Q92673 2214 aa16.45■□□□□ 0.22
HMGA2-203ENST00000393578 KNCNA6PVL3 124 aa16.45■□□□□ 0.22
HMGA2-203ENST00000393578 RNASE3P12724 160 aaKnown RBP16.45■□□□□ 0.22
HMGA2-203ENST00000393578 EVI2AP22794 236 aa16.45■□□□□ 0.22
HMGA2-203ENST00000393578 MAP6D1Q9H9H5 199 aa16.45■□□□□ 0.22
HMGA2-203ENST00000393578 TRAV12-2A0A075B6T6 113 aa16.44■□□□□ 0.22
HMGA2-203ENST00000393578 H3BMM0 161 aa16.44■□□□□ 0.22
HMGA2-203ENST00000393578 PRSS3P2Q8NHM4 247 aa16.44■□□□□ 0.22
HMGA2-203ENST00000393578 AGRNO00468 2067 aa16.43■□□□□ 0.22
HMGA2-203ENST00000393578 LAMTOR2Q9Y2Q5 125 aa16.43■□□□□ 0.22
HMGA2-203ENST00000393578 IGHV1-24A0A0C4DH33 117 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 SMKR1H3BMG3 65 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 M0R381 172 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms