RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 COL6A6A6NMZ7 2263 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 SMIM13P0DJ93 91 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 ARL3P36405 182 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 SRSF1Q07955 248 aaKnown RBP eCLIP14.34□□□□□ -0.11
CBX1-202ENST00000393408 GPHB5Q86YW7 130 aa14.34□□□□□ -0.11
CBX1-202ENST00000393408 A0A087WX48 190 aa14.33□□□□□ -0.12
CBX1-202ENST00000393408 SELENOKQ9Y6D0 94 aa14.33□□□□□ -0.12
CBX1-202ENST00000393408 ZFAND2AQ8N6M9 145 aa14.33□□□□□ -0.12
CBX1-202ENST00000393408 LINC00477Q96M19 166 aa14.33□□□□□ -0.12
CBX1-202ENST00000393408 UNQ9165/PRO28630Q6UXU0 137 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 SMIM2Q9BVW6 85 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 SPCS1Q9Y6A9 102 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 SAP30O75446 220 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 OR5A1Q8NGJ0 315 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 HIVEP3Q5T1R4 2406 aa14.32□□□□□ -0.12
CBX1-202ENST00000393408 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
CBX1-202ENST00000393408 SOCS3O14543 225 aa14.31□□□□□ -0.12
CBX1-202ENST00000393408 SAMD5Q5TGI4 173 aa14.31□□□□□ -0.12
CBX1-202ENST00000393408 TM2D2Q9BX73 214 aa14.31□□□□□ -0.12
CBX1-202ENST00000393408 J3KRW8 73 aa14.3□□□□□ -0.12
CBX1-202ENST00000393408 FABP2P12104 132 aa14.3□□□□□ -0.12
CBX1-202ENST00000393408 MAPKAPK5-AS1Q8N8E1 139 aa14.3□□□□□ -0.12
CBX1-202ENST00000393408 NDUFA4O00483 81 aa14.3□□□□□ -0.12
CBX1-202ENST00000393408 OVOL1O14753 267 aa14.3□□□□□ -0.12
CBX1-202ENST00000393408 PHLDA1Q8WV24 401 aaPredicted RBP14.3□□□□□ -0.12
CBX1-202ENST00000393408 TRAV21A0A0B4J279 112 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 PLNP26678 52 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 CEND1Q8N111 149 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 MEGF9Q9H1U4 602 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 TRAV12-1A0A0B4J245 112 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 IGHV1-69DA0A0B4J2H0 117 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.29□□□□□ -0.12
CBX1-202ENST00000393408 IGHV1-69P01742 117 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 NEGR1Q7Z3B1 354 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 RASL10AQ92737 203 aa14.29□□□□□ -0.12
CBX1-202ENST00000393408 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
CBX1-202ENST00000393408 ABCA2Q9BZC7 2435 aa14.28□□□□□ -0.12
CBX1-202ENST00000393408 K7ERJ3 54 aa14.28□□□□□ -0.12
CBX1-202ENST00000393408 M0R381 172 aa14.28□□□□□ -0.12
CBX1-202ENST00000393408 SPRY2O43597 315 aa14.27□□□□□ -0.12
CBX1-202ENST00000393408 DEFB1P60022 68 aa14.27□□□□□ -0.12
CBX1-202ENST00000393408 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.12
CBX1-202ENST00000393408 IGHV4-39P01824 125 aa14.27□□□□□ -0.13
CBX1-202ENST00000393408 SUMO2P61956 95 aaKnown RBP14.27□□□□□ -0.13
CBX1-202ENST00000393408 COTL1Q14019 142 aa14.27□□□□□ -0.13
CBX1-202ENST00000393408 ORMDL2Q53FV1 153 aa14.27□□□□□ -0.13
CBX1-202ENST00000393408 DPH3P1Q9H4G8 78 aa14.27□□□□□ -0.13
CBX1-202ENST00000393408 H7C1H1 209 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 ASIPP42127 132 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 FAM19A4Q96LR4 140 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 C20orf78Q9BR46 151 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 F8VRH5 84 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 C19orf84I3L1E1 186 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 S100A4P26447 101 aaKnown RBP14.26□□□□□ -0.13
CBX1-202ENST00000393408 ANXA2RQ3ZCQ2 193 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 TOMM6Q96B49 74 aa14.26□□□□□ -0.13
CBX1-202ENST00000393408 NHP2Q9NX24 153 aaKnown RBP14.26□□□□□ -0.13
CBX1-202ENST00000393408 SLC25A16P16260 332 aa14.25□□□□□ -0.13
CBX1-202ENST00000393408 AKAP6Q13023 2319 aa14.25□□□□□ -0.13
CBX1-202ENST00000393408 MED14OSP0DP75 135 aa14.25□□□□□ -0.13
CBX1-202ENST00000393408 TAL2Q16559 108 aa14.25□□□□□ -0.13
CBX1-202ENST00000393408 C14orf178Q8N769 122 aaPredicted RBP14.25□□□□□ -0.13
CBX1-202ENST00000393408 RPL39LQ96EH5 51 aaKnown RBP14.25□□□□□ -0.13
CBX1-202ENST00000393408 PHLDA3Q9Y5J5 127 aa14.25□□□□□ -0.13
CBX1-202ENST00000393408 RNF223E7ERA6 249 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 G3V4G9 280 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 BRI3O95415 125 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 APRG1Q8IVJ8 170 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 SCGB3A1Q96QR1 104 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 LY6DQ14210 128 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 KLK15Q9H2R5 256 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 ZFHX3Q15911 3703 aa14.24□□□□□ -0.13
CBX1-202ENST00000393408 K7EMI3 77 aa14.23□□□□□ -0.13
CBX1-202ENST00000393408 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
CBX1-202ENST00000393408 RNASE4P34096 147 aaKnown RBP14.23□□□□□ -0.13
CBX1-202ENST00000393408 NEXN-AS1Q8NBZ9 246 aa14.23□□□□□ -0.13
CBX1-202ENST00000393408 CHTOPQ9Y3Y2 248 aaKnown RBP14.23□□□□□ -0.13
CBX1-202ENST00000393408 F6UB75 175 aa14.23□□□□□ -0.13
CBX1-202ENST00000393408 H3BUA1 57 aa14.23□□□□□ -0.13
CBX1-202ENST00000393408 IGHG2P01859 326 aa14.22□□□□□ -0.13
CBX1-202ENST00000393408 CSTL1Q9H114 145 aa14.22□□□□□ -0.13
CBX1-202ENST00000393408 LY6EQ16553 131 aa14.22□□□□□ -0.13
CBX1-202ENST00000393408 SPOCK3Q9BQ16 436 aa14.22□□□□□ -0.13
CBX1-202ENST00000393408 GNRH2O43555 120 aa14.21□□□□□ -0.13
CBX1-202ENST00000393408 MGPP08493 103 aa14.21□□□□□ -0.13
CBX1-202ENST00000393408 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
CBX1-202ENST00000393408 RPL11P62913 178 aaKnown RBP14.21□□□□□ -0.13
CBX1-202ENST00000393408 IGHV4-61A0A0C4DH41 118 aa14.21□□□□□ -0.14
CBX1-202ENST00000393408 TRBV7-9A0A0J9YWB2 115 aa14.21□□□□□ -0.14
CBX1-202ENST00000393408 E9PLD3 99 aa14.21□□□□□ -0.14
CBX1-202ENST00000393408 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.14
CBX1-202ENST00000393408 AGRNO00468 2067 aa14.21□□□□□ -0.14
CBX1-202ENST00000393408 C2orf66Q6UXQ4 117 aa14.2□□□□□ -0.14
CBX1-202ENST00000393408 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 A6NDX4 124 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 OR11H12B2RN74 326 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 IGLL5B9A064 214 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms