RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TICRRQ7Z2Z1 1910 aa10.36□□□□□ -0.75
LCA5-202ENST00000392959 Q6ZVH6 145 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 C22orf46C9J442 243 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 CFHR3Q02985 330 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 TMEM243Q9BU79 118 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 F8WEM9 126 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 NUPR1O60356 82 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 RNF114Q9Y508 228 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 ZNF493Q6ZR52 646 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 PCP2Q8IVA1 136 aa10.35□□□□□ -0.75
LCA5-202ENST00000392959 IGHV7-4-1A0A0J9YVY3 117 aa10.34□□□□□ -0.75
LCA5-202ENST00000392959 MUC6Q6W4X9 2439 aa10.34□□□□□ -0.75
LCA5-202ENST00000392959 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
LCA5-202ENST00000392959 MAPK1IP1LQ8NDC0 245 aa10.33□□□□□ -0.75
LCA5-202ENST00000392959 CCL25O15444 150 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 LENEPQ9Y5L5 61 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 GAGE7O76087 117 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 GAGE12FP0CL80 117 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 GAGE12GP0CL81 117 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 GAGE12IP0CL82 117 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 UTF1Q5T230 341 aa10.33□□□□□ -0.76
LCA5-202ENST00000392959 K7EMI3 77 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 FOXE3Q13461 319 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 NXPH4O95158 308 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 F6UB75 175 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
LCA5-202ENST00000392959 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 GAGE6Q13070 117 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 CFHR4Q92496 578 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 ATP6V0BQ99437 205 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 NCOA6Q14686 2063 aaPredicted RBP10.31□□□□□ -0.76
LCA5-202ENST00000392959 GP9P14770 177 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
LCA5-202ENST00000392959 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 GNRH2O43555 120 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 PATE2Q6UY27 113 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 MRPL53Q96EL3 112 aaKnown RBP10.31□□□□□ -0.76
LCA5-202ENST00000392959 LHBP01229 141 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 HERVK_113P63121 156 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 KRTAP27-1Q3LI81 207 aa10.31□□□□□ -0.76
LCA5-202ENST00000392959 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
LCA5-202ENST00000392959 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
LCA5-202ENST00000392959 F5H768 121 aa10.3□□□□□ -0.76
LCA5-202ENST00000392959 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
LCA5-202ENST00000392959 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
LCA5-202ENST00000392959 CFC1P0CG37 223 aa10.3□□□□□ -0.76
LCA5-202ENST00000392959 ELANEP08246 267 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 IFITM1P13164 125 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 DAD1P61803 113 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 LINC00173Q6ZV60 143 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 RHOHQ15669 191 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 RNASE13Q5GAN3 156 aaKnown RBP10.29□□□□□ -0.76
LCA5-202ENST00000392959 CUL9Q8IWT3 2517 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 LINC01545Q5VT33 79 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 TRAV13-2A0A0B4J235 113 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 K7EIM0 57 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 HAMPP81172 84 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
LCA5-202ENST00000392959 H3BUA1 57 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 CR1LQ2VPA4 569 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 SPRNQ5BIV9 151 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 SP5Q6BEB4 398 aaPredicted RBP10.28□□□□□ -0.76
LCA5-202ENST00000392959 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 I3L2K1 104 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 PSCAO43653 123 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 SHISA9B4DS77 424 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 DENND4CQ5VZ89 1909 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 CDK2AP2O75956 126 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 FAM167A-AS1Q96KT0 104 aa10.28□□□□□ -0.76
LCA5-202ENST00000392959 SORL1Q92673 2214 aa10.27□□□□□ -0.76
LCA5-202ENST00000392959 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.76
LCA5-202ENST00000392959 SPRY2O43597 315 aa10.27□□□□□ -0.77
LCA5-202ENST00000392959 IGF2BP2-AS1Q96M15 143 aa10.27□□□□□ -0.77
LCA5-202ENST00000392959 DEFB121Q5J5C9 76 aa10.27□□□□□ -0.77
LCA5-202ENST00000392959 ARHGAP21Q5T5U3 1957 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 J3QLI3 93 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 SCRT2Q9NQ03 307 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 CENPVL3A0A0U1RRI6 287 aa10.26□□□□□ -0.77
LCA5-202ENST00000392959 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 CRLF1O75462 422 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 C15orf53Q8NAA6 179 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 IGLL5B9A064 214 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 IGLV11-55A0A075B6I3 123 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 IGHV7-81A0A0B4J1V7 117 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 PLXNB1O43157 2135 aa10.25□□□□□ -0.77
LCA5-202ENST00000392959 CTSGP08311 255 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms