RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 UBE2E1P51965 193 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 RIGQ13278 110 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 WDR86Q86TI4 376 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 ZNF488Q96MN9 340 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 CCL13Q99616 98 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 ONECUT1Q9UBC0 465 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 U3KQK5 164 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 NPFFO15130 113 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 IGHV4-59P01825 116 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 TMEM78Q5T7P6 136 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 LINC00322Q6ZN03 302 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 UBALD1Q8TB05 177 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 DNAJC30Q96LL9 226 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 MDFICQ9P1T7 246 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 EPDR1Q9UM22 224 aa8.86□□□□□ -0.99
TRAF3IP2-208ENST00000392556 WI2-2373I1.2A0A1W2PRP0 233 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 IFI27P40305 119 aaPredicted RBP8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 SRSF8Q9BRL6 282 aaKnown RBP8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 IGHV3OR15-7A0A075B7D8 119 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 A0A1B0GUT8 65 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 OR2H2O95918 312 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FAM106CPP0CH98 169 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FAM106AQ4KMX7 169 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 MORN3Q6PF18 240 aaPredicted RBP8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FAM216BQ8N7L0 139 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FMC1Q96HJ9 113 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 KIR2DL4Q99706 377 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 DKK2Q9UBU2 259 aa8.85□□□□□ -0.99
TRAF3IP2-208ENST00000392556 SNCGO76070 127 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 ERVK-16P61578 105 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 ANXA2RQ3ZCQ2 193 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FAM159AQ6UWV7 190 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 Q6ZSV7 163 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 PAXXQ9BUH6 204 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 FBXL15Q9H469 300 aa8.84□□□□□ -0.99
TRAF3IP2-208ENST00000392556 TRBV7-3A0A075B6L6 115 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 J3QT63 122 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 MOSP00540 346 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 MYOD1P15172 320 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 LYRM7Q5U5X0 104 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 Q8IYB0 196 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 ZNF714Q96N38 554 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 GAFA1Q96PS6 74 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 TRBV20-1A0A075B6N2 111 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 TMEM30CPA0ZSE6 113 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 TMEM213A2RRL7 107 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 C12orf77C9JDV5 145 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 PPP1R27Q86WC6 154 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 RASL10AQ92737 203 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 AJUBAQ96IF1 538 aa8.83□□□□□ -1
TRAF3IP2-208ENST00000392556 IL4P05112 153 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 HSPE1P61604 102 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 HOXA4Q00056 320 aaPredicted RBP8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 POU2AF1Q16633 256 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 ENY2Q9NPA8 101 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 IGKV1OR2-108A0A075B7D4 117 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 C15orf61A6NNL5 157 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 IGKCP01834 107 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 SAA4P35542 130 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 OR10J6PQ8NGY7 276 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 FXYD5Q96DB9 178 aa8.82□□□□□ -1
TRAF3IP2-208ENST00000392556 A0A1W2PPI3 338 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 LINC01546A6NGU7 62 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 A8MWV9 139 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 FCGR3BO75015 233 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 KIR2DS2P43631 304 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 OR4C13Q8NGP0 309 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 OR1L4Q8NGR5 311 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
TRAF3IP2-208ENST00000392556 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 SCGB2A1O75556 95 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 KRTAP10-3P60369 221 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 UBE2D3P61077 147 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 UBE2D2P62837 147 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 GNG5P63218 68 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 MORN5Q5VZ52 161 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 DUX4L9Q6RFH8 374 aaPredicted RBP8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 HIST1H4GQ99525 98 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 TMEM14BQ9NUH8 114 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 SIGLEC9Q9Y336 463 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 TRAV3A0A0B4J244 114 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 LINC01587Q99440 93 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 PRNDQ9UKY0 176 aa8.8□□□□□ -1
TRAF3IP2-208ENST00000392556 IGKV1D-17A0A075B6S4 117 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 K7EMI3 77 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 DPM2O94777 84 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 PYYP10082 97 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 PSMB2P49721 201 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 LINC00205P59089 165 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
TRAF3IP2-208ENST00000392556 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms