RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CD300EQ496F6 205 aaPredicted RBP12.79□□□□□ -0.36
SNX9-201ENST00000392185 IGHV4OR15-8A0A075B7B6 117 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 A0A087WW49 117 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 A6NDX4 124 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
SNX9-201ENST00000392185 LOXL1Q08397 574 aaPredicted RBP12.78□□□□□ -0.36
SNX9-201ENST00000392185 ERASQ7Z444 233 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 CD28P10747 220 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 DEFB121Q5J5C9 76 aa12.78□□□□□ -0.36
SNX9-201ENST00000392185 PRSS46E5RG02 174 aa12.77□□□□□ -0.36
SNX9-201ENST00000392185 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.36
SNX9-201ENST00000392185 GNRH2O43555 120 aa12.77□□□□□ -0.36
SNX9-201ENST00000392185 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.36
SNX9-201ENST00000392185 A0A1B0GV90 55 aa12.77□□□□□ -0.36
SNX9-201ENST00000392185 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.36
SNX9-201ENST00000392185 LY6LH3BQJ8 138 aa12.77□□□□□ -0.37
SNX9-201ENST00000392185 DPM2O94777 84 aa12.77□□□□□ -0.37
SNX9-201ENST00000392185 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.37
SNX9-201ENST00000392185 FSTL3O95633 263 aa12.77□□□□□ -0.37
SNX9-201ENST00000392185 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.37
SNX9-201ENST00000392185 ADAMTS20P59510 1910 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 C2orf88Q9BSF0 95 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 ALKBH7Q9BT30 221 aaPredicted RBP12.76□□□□□ -0.37
SNX9-201ENST00000392185 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 J3QR89 54 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 WI2-2373I1.2A0A1W2PRP0 233 aa12.76□□□□□ -0.37
SNX9-201ENST00000392185 KRTAP10-9P60411 292 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 Q0VG73 95 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 TMEM238LA0A1B0GVL6 79 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 A6NJY4 79 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 DSCAML1Q8TD84 2053 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 VCYO14598 125 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
SNX9-201ENST00000392185 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
SNX9-201ENST00000392185 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
SNX9-201ENST00000392185 IGHV4-31P0DP07 118 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 NDUFAF3Q9BU61 184 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 CHTOPQ9Y3Y2 248 aaKnown RBP12.74□□□□□ -0.37
SNX9-201ENST00000392185 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 LAMTOR2Q9Y2Q5 125 aa12.74□□□□□ -0.37
SNX9-201ENST00000392185 CRYGBP07316 175 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 LYRM7Q5U5X0 104 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 C16orf54Q6UWD8 224 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 WIPF2Q8TF74 440 aaPredicted RBP12.73□□□□□ -0.37
SNX9-201ENST00000392185 APOMO95445 188 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 C10orf99Q6UWK7 81 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 TSSC4Q9Y5U2 329 aaPredicted RBP12.73□□□□□ -0.37
SNX9-201ENST00000392185 GAGE10A6NGK3 116 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 NPYP01303 97 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 CIRBPQ14011 172 aaKnown RBP12.73□□□□□ -0.37
SNX9-201ENST00000392185 IGKCP01834 107 aa12.73□□□□□ -0.37
SNX9-201ENST00000392185 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
SNX9-201ENST00000392185 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
SNX9-201ENST00000392185 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
SNX9-201ENST00000392185 MEGF9Q9H1U4 602 aa12.72□□□□□ -0.37
SNX9-201ENST00000392185 LAMA1P25391 3075 aa12.72□□□□□ -0.37
SNX9-201ENST00000392185 SNCGO76070 127 aa12.72□□□□□ -0.37
SNX9-201ENST00000392185 ATP6V0BQ99437 205 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 GAGE12BA1L429 117 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 GAGE7O76087 117 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 GAGE12FP0CL80 117 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 GAGE12GP0CL81 117 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 GAGE12IP0CL82 117 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 IGLC2P0DOY2 106 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
SNX9-201ENST00000392185 ZC2HC1BQ5TFG8 222 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 ZNF664Q8N3J9 261 aa12.71□□□□□ -0.37
SNX9-201ENST00000392185 FOSL1P15407 271 aa12.71□□□□□ -0.38
SNX9-201ENST00000392185 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.38
SNX9-201ENST00000392185 OR9G4Q8NGQ1 327 aa12.71□□□□□ -0.38
SNX9-201ENST00000392185 RPL13AP40429 203 aaKnown RBP12.7□□□□□ -0.38
SNX9-201ENST00000392185 C2orf70A6NJV1 201 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 FABP2P12104 132 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 AVPP01185 164 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 EBI3Q14213 229 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 STPG4Q8N801 248 aa12.7□□□□□ -0.38
SNX9-201ENST00000392185 CITED2Q99967 270 aaPredicted RBP12.69□□□□□ -0.38
SNX9-201ENST00000392185 VCANP13611 3396 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 DSPP15924 2871 aaKnown RBP12.69□□□□□ -0.38
SNX9-201ENST00000392185 A0A087WX48 190 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 SDHAF1A6NFY7 115 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 SIGLEC8Q9NYZ4 499 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 DNAJC9-AS1A6NH13 148 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 GAGE1Q13065 139 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 GAGE4Q13068 117 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 GAGE5Q13069 117 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 Q6ZWC4 215 aa12.69□□□□□ -0.38
SNX9-201ENST00000392185 PYGO2Q9BRQ0 406 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms