RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 F6UB75 175 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 CEND1Q8N111 149 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 NXT2Q9NPJ8 142 aaKnown RBP11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 CELSR2Q9HCU4 2923 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 PSMB2P49721 201 aa11.24□□□□□ -0.61
LRRFIP1-204ENST00000392000 TCF15Q12870 199 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 MYO18BQ8IUG5 2567 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGLL5B9A064 214 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
LRRFIP1-204ENST00000392000 GAGE12HA6NDE8 117 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 LAGE3Q14657 143 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 IGLV11-55A0A075B6I3 123 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 J3QR89 54 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 HOXB4P17483 251 aaPredicted RBP11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 RPS20P60866 119 aaKnown RBP11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 FAM74A4Q5TZK3 123 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
LRRFIP1-204ENST00000392000 HTN1P15515 57 aa11.21□□□□□ -0.61
LRRFIP1-204ENST00000392000 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.61
LRRFIP1-204ENST00000392000 TNFRSF14Q92956 283 aa11.21□□□□□ -0.61
LRRFIP1-204ENST00000392000 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
LRRFIP1-204ENST00000392000 RAXQ9Y2V3 346 aa11.21□□□□□ -0.61
LRRFIP1-204ENST00000392000 ATP6V0E1O15342 81 aa11.21□□□□□ -0.62
LRRFIP1-204ENST00000392000 SCGB2A1O75556 95 aa11.21□□□□□ -0.62
LRRFIP1-204ENST00000392000 ZFP36P26651 326 aaKnown RBP11.21□□□□□ -0.62
LRRFIP1-204ENST00000392000 PDE6HQ13956 83 aa11.21□□□□□ -0.62
LRRFIP1-204ENST00000392000 PHLDA3Q9Y5J5 127 aa11.21□□□□□ -0.62
LRRFIP1-204ENST00000392000 IGHG4P01861 327 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 IGLC6P0CF74 106 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 LINC01549A6NIU2 74 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 LY6LH3BQJ8 138 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 LY6EQ16553 131 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 CHTOPQ9Y3Y2 248 aaKnown RBP11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 CCDC168Q8NDH2 2452 aa11.2□□□□□ -0.62
LRRFIP1-204ENST00000392000 ATP5LO75964 103 aa11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 RNASE4P34096 147 aaKnown RBP11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 SLC25A16P16260 332 aa11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 U3KQK5 164 aa11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 FLNCQ14315 2725 aa11.19□□□□□ -0.62
LRRFIP1-204ENST00000392000 TMEM170BQ5T4T1 132 aa11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 DPF1Q92782 380 aa11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 SRSF8Q9BRL6 282 aaKnown RBP11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 ZANQ9Y493 2812 aa11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 Q8N8P6 123 aa11.18□□□□□ -0.62
LRRFIP1-204ENST00000392000 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 METTL26Q96S19 204 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 A0A087WWL8 130 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 SIVA1O15304 175 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 GNRH2O43555 120 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 ZFP2Q6ZN57 461 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 JPT2Q9H910 190 aa11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
LRRFIP1-204ENST00000392000 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 JMJD1CQ15652 2540 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 BUB3O43684 328 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 NDUFS8O00217 210 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 PRR9Q5T870 116 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
LRRFIP1-204ENST00000392000 PLEKHB2Q96CS7 222 aa11.15□□□□□ -0.62
LRRFIP1-204ENST00000392000 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
LRRFIP1-204ENST00000392000 LINC00477Q96M19 166 aa11.15□□□□□ -0.62
LRRFIP1-204ENST00000392000 A0A1W2PPR1 153 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 PRTN3P24158 256 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 CSMD2Q7Z408 3487 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 RAB9AP51151 201 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 CKS1BP61024 79 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 PAX8Q06710 450 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 A0A087WX48 190 aa11.14□□□□□ -0.63
LRRFIP1-204ENST00000392000 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 Q1RN00 199 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 CCDC144NLQ6NUI1 221 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 H7C1H1 209 aa11.13□□□□□ -0.63
LRRFIP1-204ENST00000392000 CIDEAO60543 219 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms