RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 ZCCHC11Q5TAX3 1644 aaKnown RBP0.08□□□□□ -2.4
SNORA40.2-201ENST00000390847 SDC4P31431 198 aa0.07□□□□□ -2.4
SNORA40.2-201ENST00000390847 POLR2JP52435 117 aaKnown RBP0.07□□□□□ -2.4
SNORA40.2-201ENST00000390847 TMEM128Q5BJH2 165 aa0.07□□□□□ -2.4
SNORA40.2-201ENST00000390847 TMEM35BQ8NCS4 154 aa0.07□□□□□ -2.4
SNORA40.2-201ENST00000390847 CCDC115Q96NT0 180 aa0.07□□□□□ -2.4
SNORA40.2-201ENST00000390847 CDK12Q9NYV4 1490 aaPredicted RBP0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 PTPRZ1P23471 2315 aaPredicted RBP0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 PNMA8CA0A1B0GUJ8 204 aa0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 PGRMC1O00264 195 aaKnown RBP0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 SLC25A5P05141 298 aaKnown RBP0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 ADCYAP1P18509 176 aa0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 VMO1Q7Z5L0 202 aa0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 CENPHQ9H3R5 247 aa0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 PROK2Q9HC23 129 aa0.06□□□□□ -2.4
SNORA40.2-201ENST00000390847 TRPM7Q96QT4 1865 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 ZCCHC6Q5VYS8 1495 aaKnown RBP0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 MPC1LP0DKB6 136 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 PSPHP78330 225 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 TOMM20LQ6UXN7 152 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 OR4S1Q8NGB4 309 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 SMPXQ9UHP9 88 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 CPDO75976 1380 aa0.05□□□□□ -2.4
SNORA40.2-201ENST00000390847 RBBP6Q7Z6E9 1792 aaKnown RBP0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 A0A096LNT2 108 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 TRAV17A0A0B4J275 112 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 TCRAP04437 139 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 S100GP29377 79 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 TFAMQ00059 246 aaKnown RBP0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 DSCR8Q96T75 97 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 NINQ8N4C6 2090 aa0.04□□□□□ -2.4
SNORA40.2-201ENST00000390847 ATG2AQ2TAZ0 1938 aa0.03□□□□□ -2.4
SNORA40.2-201ENST00000390847 TRBV10-1A0A0K0K1A3 114 aa0.03□□□□□ -2.4
SNORA40.2-201ENST00000390847 SPINK1P00995 79 aa0.03□□□□□ -2.4
SNORA40.2-201ENST00000390847 NEFHP12036 1026 aa0.03□□□□□ -2.4
SNORA40.2-201ENST00000390847 Q5XG85 94 aa0.03□□□□□ -2.4
SNORA40.2-201ENST00000390847 TTC28Q96AY4 2481 aa0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 ABCA12Q86UK0 2595 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 C9JAW5 83 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 APOC1P02654 83 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 HIST1H1BP16401 226 aaKnown RBP0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 HSD17B12Q53GQ0 312 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 TMEM141Q96I45 108 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 COA4Q9NYJ1 87 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 METTL1Q9UBP6 276 aaKnown RBP0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 MED23Q9ULK4 1368 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 BLMP54132 1417 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 KDM6BO15054 1643 aa0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 IGF2RP11717 2491 aa0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 S100A5P33763 92 aa0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 PPP1R1CQ8WVI7 109 aa0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 CALML5Q9NZT1 146 aa0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 SPAG17Q6Q759 2223 aa0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 IGSF10Q6WRI0 2623 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 TEX49A0A1B0GTD5 131 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 PTPRGP23470 1445 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 JMJD1CQ15652 2540 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 Q5BKY6 102 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 SMIM15Q7Z3B0 74 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 SKA2Q8WVK7 121 aaPredicted RBP0□□□□□ -2.41
SNORA40.2-201ENST00000390847 VPS25Q9BRG1 176 aa0□□□□□ -2.41
SNORA40.2-201ENST00000390847 CACNA1HO95180 2353 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 ESPL1Q14674 2120 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 AFDNP55196 1824 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 F2Z2F3 143 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 J3KT08 172 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 DPM2O94777 84 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 OR2H2O95918 312 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 TFF1P04155 84 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 PLGLB1Q02325 96 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 OR8I2Q8N0Y5 310 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 PRR15LQ9BU68 103 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 FER1L6Q2WGJ9 1857 aa-0.01□□□□□ -2.41
SNORA40.2-201ENST00000390847 NCOR2Q9Y618 2525 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 RREB1Q92766 1687 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 MCRIP1C9JLW8 97 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 PAEPP09466 180 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 PPDPFLQ8WWR9 84 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 DDA1Q9BW61 102 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 SLC35B3Q9H1N7 401 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 BET1LQ9NYM9 111 aa-0.02□□□□□ -2.41
SNORA40.2-201ENST00000390847 OTOGQ6ZRI0 2925 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 OVOS2A0A0G2JMS6 1433 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 ZNF670-ZNF695F2Z2N8 137 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 TSTD3H0UI37 97 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 MT-ND4LP03901 98 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 PYYP10082 97 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 AKR1D1P51857 326 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 SLC25A26Q70HW3 274 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 SELENOSQ9BQE4 189 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 TAS2R8Q9NYW2 309 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 NDUFAF1Q9Y375 327 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 PBRM1Q86U86 1689 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 LRP5O75197 1615 aa-0.03□□□□□ -2.41
SNORA40.2-201ENST00000390847 FSIP2Q5CZC0 6907 aa-0.04□□□□□ -2.42
SNORA40.2-201ENST00000390847 ABCA1O95477 2261 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms