RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
IGHV4-28-201ENST00000390612 C8orf49Q96NF6 230 aa7.89□□□□□ -1.15
IGHV4-28-201ENST00000390612 NKX6-2Q9C056 277 aaPredicted RBP7.89□□□□□ -1.15
IGHV4-28-201ENST00000390612 A0A096LPF7 62 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 A0A1B0GVY2 172 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 MAP1LC3B2A6NCE7 125 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 K7EQM0 130 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 BCL2L11O43521 198 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 TYMSP04818 313 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 FHITP49789 147 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 ESRGQ1W209 222 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 KCNS1Q96KK3 526 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 LINC00479Q96M42 142 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 NDFIP1Q9BT67 221 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 UPK3BQ9BT76 320 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 MAP1LC3BQ9GZQ8 125 aa7.88□□□□□ -1.15
IGHV4-28-201ENST00000390612 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 CRYBA4P53673 196 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 UBE2G2P60604 165 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 SLAQ13239 276 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 Q6ZNX1 250 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 TMUB2Q71RG4 321 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 HIST1H2BAQ96A08 127 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 PRO0255Q9UI72 69 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 ARL2-SNX15V9GYD0 113 aa7.87□□□□□ -1.15
IGHV4-28-201ENST00000390612 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 NBDYA0A0U1RRE5 68 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 M0R2P5 195 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 PEX7O00628 323 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 GCGP01275 180 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 PFN1P07737 140 aaKnown RBP7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 TCTE3Q8IZS6 198 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 STOML3Q8TAV4 291 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 PTH2Q96A98 100 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 ZNF479Q96JC4 524 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 SDF2L1Q9HCN8 221 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 HHLA3Q9XRX5 114 aa7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
IGHV4-28-201ENST00000390612 TRAV4A0A0B4J268 109 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 TRBV6-1A0A0K0K1D8 114 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 KANTRA0A1W2PQU2 76 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 PAX4O43316 350 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 IFNA7P01567 189 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 IGHV3-53P01767 116 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 LGALSLQ3ZCW2 172 aaPredicted RBP7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 DPPA3Q6W0C5 159 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 C9orf85Q96MD7 179 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 TCEAL7Q9BRU2 100 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 Q9H8V8 135 aa7.85□□□□□ -1.15
IGHV4-28-201ENST00000390612 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 SFTA3P0C7M3 94 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 RNASE3P12724 160 aaKnown RBP7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 CRIP1P50238 77 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 PPT1P50897 306 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 EIF5AP63241 154 aaKnown RBP7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 C1orf134Q5TEV5 83 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 Q86TA4 180 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 ZNF575Q86XF7 245 aa7.84□□□□□ -1.15
IGHV4-28-201ENST00000390612 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 ZFP69Q49AA0 526 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 DNLZQ5SXM8 178 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 FAM213BQ8TBF2 198 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 KRTAP1-5Q9BYS1 174 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 ZFP30Q9Y2G7 519 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 ICOSQ9Y6W8 199 aa7.83□□□□□ -1.16
IGHV4-28-201ENST00000390612 KIAA1109Q2LD37 5005 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 TRAV1-1A0A0B4J248 108 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 RS1O15537 224 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 PAGE4O60829 102 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 C1QBP02746 253 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 TPT1P13693 172 aaKnown RBP7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 MRPL23Q16540 153 aaKnown RBP7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 ZC2HC1AQ96GY0 325 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 HERC2O95714 4834 aa7.82□□□□□ -1.16
IGHV4-28-201ENST00000390612 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 A0A1W2PPQ1 181 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 PGPEP1LA6NFU8 196 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 K7EQD1 137 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 CIDEAO60543 219 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 PFDN1O60925 122 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 LTAP01374 205 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 GATA1P15976 413 aaPredicted RBP7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 SOHLH1Q5JUK2 328 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 PIK3CD-AS1Q5SR53 167 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
IGHV4-28-201ENST00000390612 CST9LP1Q5W188 147 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms