RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 FANCD2OSQ96PS1 177 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 LINC00467Q9BRT7 94 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 ANAPC13Q9BS18 74 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 PRADC1Q9BSG0 188 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 TPPP3Q9BW30 176 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 HES7Q9BYE0 225 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 GEMIN7Q9H840 131 aaKnown RBP1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 ZFAND3Q9H8U3 227 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 TMEM160Q9NX00 188 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 PGPEP1Q9NXJ5 209 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 CTSZQ9UBR2 303 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 PRO0461Q9UI25 63 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 UFC1Q9Y3C8 167 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 CSDC2Q9Y534 153 aaKnown RBP1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 TRANK1O15050 2925 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 SDK1Q7Z5N4 2213 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 ZDBF2Q9HCK1 2354 aa1.54□□□□□ -2.16
TRAJ49-201ENST00000390488 DNAH12Q6ZR08 3092 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 IGLV5-45A0A087WSX0 123 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 IGHV7-81A0A0B4J1V7 117 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 TRAV13-2A0A0B4J235 113 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 A0A0J9YY99 117 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 TRBV10-3A0A0K0K1G6 114 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 IGIPA6NJ69 53 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 NDUFC2-KCTD14E9PQ53 114 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 F8W735 103 aaPredicted RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 H3BMM0 161 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 I3L3M4 83 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 J3QQQ9 107 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 UQCRQO14949 82 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 NKX2-8O15522 239 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 IGHV3-30P01768 117 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 FRMD6-AS1P0C7T7 363 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 CFC1BP0CG36 223 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 CFC1P0CG37 223 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 IGHV3-30-5P0DP03 117 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 PDE6GP18545 87 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 CRIP1P50238 77 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 EFNA4P52798 201 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 POLR2KP53803 58 aaKnown RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ATP5EP56381 51 aaPredicted RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 TIRAPP58753 221 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 RPS28P62857 69 aaKnown RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 HERVK_113P63121 156 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ERCC8Q13216 396 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 FAM106AQ4KMX7 169 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 C19orf54Q5BKX5 351 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 VHLLQ6RSH7 139 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 C2orf82Q6UX34 121 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ZFP2Q6ZN57 461 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 VMO1Q7Z5L0 202 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 LINC00643Q86TS7 51 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 NAV3Q8IVL0 2385 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 CUL9Q8IWT3 2517 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 INTS1Q8N201 2190 aaKnown RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 C11orf44Q8N8P7 122 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 PRSS33Q8NF86 280 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ZNRF2Q8NHG8 242 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ITLN2Q8WWU7 325 aaPredicted RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 BAALCQ8WXS3 180 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 MED12Q93074 2177 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 UBE2WQ96B02 151 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 C16orf92Q96LL3 132 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 SPAG8Q99932 426 aaPredicted RBP1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 FAM110AQ9BQ89 295 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 ARRDC1-AS1Q9H2J1 176 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 TPSG1Q9NRR2 321 aa1.53□□□□□ -2.16
TRAJ49-201ENST00000390488 BRCA2P51587 3418 aa1.53□□□□□ -2.17
TRAJ49-201ENST00000390488 ESPL1Q14674 2120 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TRAV8-2A0A0B4J237 113 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TRAV8-4A0A0B4J246 113 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TRAV41A0A0B4J266 112 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TRAV25A0A0B4J276 109 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 IGKV3D-20A0A0C4DH25 116 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 IGHV1-58A0A0C4DH39 117 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 LOC107984156A0A0G2JMH3 177 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 A0A0G2JNJ9 132 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 LOC389332A0A1B0GUA5 103 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TINCRA0A1B0GVN0 87 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 A0A1B0GW54 56 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 TMEM223A0PJW6 202 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 PRSS29PA6NIE9 313 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 A8MTW9 85 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 PATE3B3GLJ2 98 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 E7EUB6 86 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 JMJD7-PLA2G4BH0Y9G9 81 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 H0YGX0 51 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 J3QLI3 93 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 LST1O00453 97 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 SOCS3O14543 225 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 COX7A2LO14548 114 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 SAP30O75446 220 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 DNAL4O96015 105 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 IGHG2P01859 326 aa1.52□□□□□ -2.17
TRAJ49-201ENST00000390488 ELANEP08246 267 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms