RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 F8VRH5 84 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 CTSZQ9UBR2 303 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 CD7P09564 240 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 EFNA4P52798 201 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 PDE6HQ13956 83 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 ZNF491Q8N8L2 437 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
VPS9D1-201ENST00000389386 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 TRAV12-1A0A0B4J245 112 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 FABP5P3A8MUU1 101 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 M0QXV9 152 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 PRTN3P24158 256 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 LY6DQ14210 128 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 TMEM200BQ69YZ2 307 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 VPREB3Q9UKI3 123 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 SPTBN1Q01082 2364 aaKnown RBP11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 TRBV20-1A0A075B6N2 111 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 IGHV1-46P01743 117 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 ORM1P02763 201 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 CRYGBP07316 175 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 CNTFRP26992 372 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 SRSF2Q01130 221 aaKnown RBP11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 GFRALQ6UXV0 394 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 Q8TAT8 98 aa11.35□□□□□ -0.59
VPS9D1-201ENST00000389386 UCNP55089 124 aa11.34□□□□□ -0.59
VPS9D1-201ENST00000389386 PPDPFQ9H3Y8 114 aa11.34□□□□□ -0.59
VPS9D1-201ENST00000389386 RNF125Q96EQ8 232 aa11.34□□□□□ -0.59
VPS9D1-201ENST00000389386 H3BVH4 76 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 NRACQ8N912 160 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 SIGLEC9Q9Y336 463 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 TRAV4A0A0B4J268 109 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 ASIPP42127 132 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 NDUFA11Q86Y39 141 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
VPS9D1-201ENST00000389386 IGLV3-9A0A075B6K5 115 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 FCN3O75636 299 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 C8orf31Q8N9H6 132 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 CRLF1O75462 422 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 IFITM1P13164 125 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
VPS9D1-201ENST00000389386 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 SNCGO76070 127 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 ANKHD1Q8IWZ3 2542 aaKnown RBP11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 K7EIM0 57 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 BSPH1Q075Z2 132 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 IGSF10Q6WRI0 2623 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 EPG5Q9HCE0 2579 aa11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 ASH1LQ9NR48 2969 aaKnown RBP11.31□□□□□ -0.6
VPS9D1-201ENST00000389386 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 TRGV3P03979 118 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 COX6B1P14854 86 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
VPS9D1-201ENST00000389386 TGFAP01135 160 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 Q6Q795 121 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 VKORC1Q9BQB6 163 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 MED13LQ71F56 2210 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 SCGB1C2P0DMR2 95 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 SPTAN1Q13813 2472 aaKnown RBP11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 TRAV8-2A0A0B4J237 113 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 SLC25A16P16260 332 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
VPS9D1-201ENST00000389386 IGHG4P01861 327 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 SLC25A20O43772 301 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 CFC1BP0CG36 223 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 CFC1P0CG37 223 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 CCL17Q92583 94 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 SCGB3A1Q96QR1 104 aa11.28□□□□□ -0.6
VPS9D1-201ENST00000389386 HIVEP3Q5T1R4 2406 aa11.27□□□□□ -0.6
VPS9D1-201ENST00000389386 IGFL4Q6B9Z1 124 aa11.27□□□□□ -0.61
VPS9D1-201ENST00000389386 C10orf126Q8N4M7 172 aa11.27□□□□□ -0.61
VPS9D1-201ENST00000389386 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.61
VPS9D1-201ENST00000389386 CSMD1Q96PZ7 3565 aa11.27□□□□□ -0.61
VPS9D1-201ENST00000389386 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 B9A039 149 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 RASL10AQ92737 203 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 C5orf47Q569G3 176 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 Q6ZQT7 251 aa11.26□□□□□ -0.61
VPS9D1-201ENST00000389386 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms