RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 ANXA2RQ3ZCQ2 193 aa19.74■□□□□ 0.75
MSX1-201ENST00000382723 ZNF324O75467 553 aaPredicted RBP19.73■□□□□ 0.75
MSX1-201ENST00000382723 TYMSP04818 313 aa19.73■□□□□ 0.75
MSX1-201ENST00000382723 FOXA3P55318 350 aaPredicted RBP19.72■□□□□ 0.75
MSX1-201ENST00000382723 DEFB125Q8N687 156 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 SRD5A3Q9H8P0 318 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 NOTCH3Q9UM47 2321 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 CRXO43186 299 aaPredicted RBP19.72■□□□□ 0.75
MSX1-201ENST00000382723 SSTP61278 116 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 LYZL1Q6UWQ5 148 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 CLUHP3Q96NS8 147 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 MDFIQ99750 246 aa19.72■□□□□ 0.75
MSX1-201ENST00000382723 FER1L6-AS1Q8NA97 138 aa19.71■□□□□ 0.75
MSX1-201ENST00000382723 MUC21A0A0G2JKD1 596 aa19.7■□□□□ 0.74
MSX1-201ENST00000382723 MUC21A0A140T8X8 626 aa19.7■□□□□ 0.74
MSX1-201ENST00000382723 FAM159AQ6UWV7 190 aa19.7■□□□□ 0.74
MSX1-201ENST00000382723 RPL35AP18077 110 aaKnown RBP19.7■□□□□ 0.74
MSX1-201ENST00000382723 OXLD1Q5BKU9 147 aa19.7■□□□□ 0.74
MSX1-201ENST00000382723 WIPF1O43516 503 aa19.69■□□□□ 0.74
MSX1-201ENST00000382723 ARMS2P0C7Q2 107 aa19.69■□□□□ 0.74
MSX1-201ENST00000382723 IGLC6P0CF74 106 aa19.69■□□□□ 0.74
MSX1-201ENST00000382723 GNRH2O43555 120 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 TRGC2P03986 189 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 RBMY1A1P0DJD3 496 aaKnown RBP19.68■□□□□ 0.74
MSX1-201ENST00000382723 RBMY1CP0DJD4 496 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 CAMPP49913 170 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 RBMY1FQ15415 496 aaKnown RBP19.68■□□□□ 0.74
MSX1-201ENST00000382723 XCL2Q9UBD3 114 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 RAB4BP61018 213 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 PRR31Q5SQ13 230 aa19.68■□□□□ 0.74
MSX1-201ENST00000382723 NUTF2P61970 127 aaKnown RBP19.67■□□□□ 0.74
MSX1-201ENST00000382723 TIMM8BQ9Y5J9 83 aaPredicted RBP19.67■□□□□ 0.74
MSX1-201ENST00000382723 A0A1B0GUT8 65 aa19.66■□□□□ 0.74
MSX1-201ENST00000382723 BORCS7Q96B45 105 aa19.66■□□□□ 0.74
MSX1-201ENST00000382723 ATP5L2Q7Z4Y8 100 aa19.66■□□□□ 0.74
MSX1-201ENST00000382723 LURAP1LQ8IV03 231 aa19.66■□□□□ 0.74
MSX1-201ENST00000382723 SNURFLB1AK76 121 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 H3BVH4 76 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 CTRLP40313 264 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 ASIPP42127 132 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 ZFP82Q8N141 532 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 FRZBQ92765 325 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 KCNS1Q96KK3 526 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 TRAPPC1Q9Y5R8 145 aa19.65■□□□□ 0.74
MSX1-201ENST00000382723 A0A1B0GXF2 115 aa19.64■□□□□ 0.74
MSX1-201ENST00000382723 C1orf196B1AJZ1 125 aa19.64■□□□□ 0.74
MSX1-201ENST00000382723 INSP01308 110 aa19.64■□□□□ 0.74
MSX1-201ENST00000382723 S100A4P26447 101 aaKnown RBP19.64■□□□□ 0.74
MSX1-201ENST00000382723 HBBP68871 147 aa19.64■□□□□ 0.74
MSX1-201ENST00000382723 TP53TG3Q9ULZ0 132 aa19.64■□□□□ 0.74
MSX1-201ENST00000382723 IGHV1OR15-1A0A075B7D0 117 aa19.64■□□□□ 0.73
MSX1-201ENST00000382723 FABP9Q0Z7S8 132 aa19.64■□□□□ 0.73
MSX1-201ENST00000382723 HTN1P15515 57 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 RIGQ13278 110 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 TMEM136Q6ZRR5 245 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 GNB1LQ9BYB4 327 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 AMBPP02760 352 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 WDR73Q6P4I2 378 aa19.63■□□□□ 0.73
MSX1-201ENST00000382723 F2Z2F3 143 aa19.62■□□□□ 0.73
MSX1-201ENST00000382723 TDRG1Q3Y452 100 aa19.62■□□□□ 0.73
MSX1-201ENST00000382723 RASL11AQ6T310 242 aa19.62■□□□□ 0.73
MSX1-201ENST00000382723 Q8N1Y9 231 aa19.62■□□□□ 0.73
MSX1-201ENST00000382723 SPRY2O43597 315 aa19.61■□□□□ 0.73
MSX1-201ENST00000382723 OR10AG1Q8NH19 301 aa19.61■□□□□ 0.73
MSX1-201ENST00000382723 SSBP4Q9BWG4 385 aaPredicted RBP19.61■□□□□ 0.73
MSX1-201ENST00000382723 MRPL18Q9H0U6 180 aaKnown RBP19.61■□□□□ 0.73
MSX1-201ENST00000382723 NTF3P20783 257 aa19.6■□□□□ 0.73
MSX1-201ENST00000382723 RAB5BP61020 215 aa19.6■□□□□ 0.73
MSX1-201ENST00000382723 TWIST1Q15672 202 aa19.6■□□□□ 0.73
MSX1-201ENST00000382723 COX19Q49B96 90 aa19.6■□□□□ 0.73
MSX1-201ENST00000382723 LINC01587Q99440 93 aa19.6■□□□□ 0.73
MSX1-201ENST00000382723 GIG44P09565 113 aaPredicted RBP19.59■□□□□ 0.73
MSX1-201ENST00000382723 ANK2Q01484 3957 aa19.59■□□□□ 0.73
MSX1-201ENST00000382723 CBY3A6NI87 242 aa19.59■□□□□ 0.73
MSX1-201ENST00000382723 PRM2P04554 102 aa19.59■□□□□ 0.73
MSX1-201ENST00000382723 OR5AL1P0C617 328 aa19.59■□□□□ 0.73
MSX1-201ENST00000382723 RNASE3P12724 160 aaKnown RBP19.59■□□□□ 0.73
MSX1-201ENST00000382723 IGHV3OR16-12A0A075B7B8 117 aa19.58■□□□□ 0.72
MSX1-201ENST00000382723 SNAI2O43623 268 aa19.58■□□□□ 0.72
MSX1-201ENST00000382723 TMEM208Q9BTX3 173 aa19.58■□□□□ 0.72
MSX1-201ENST00000382723 MSRB1Q9NZV6 116 aa19.58■□□□□ 0.72
MSX1-201ENST00000382723 PHOX2AO14813 284 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 HLA-DQA1P01909 254 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 MT-ND6P03923 174 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 KRTAP10-11P60412 298 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 MORN3Q6PF18 240 aaPredicted RBP19.57■□□□□ 0.72
MSX1-201ENST00000382723 C20orf144Q9BQM9 153 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 MDFICQ9P1T7 246 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 IGHV3-16A0A0C4DH30 117 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 DNLZQ5SXM8 178 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 C1orf158Q8N1D5 194 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 CNFNQ9BYD5 112 aa19.57■□□□□ 0.72
MSX1-201ENST00000382723 A0A1B0GW15 77 aa19.56■□□□□ 0.72
MSX1-201ENST00000382723 SPANXN1Q5VSR9 72 aa19.56■□□□□ 0.72
MSX1-201ENST00000382723 PHLDA3Q9Y5J5 127 aa19.56■□□□□ 0.72
MSX1-201ENST00000382723 CMYA5Q8N3K9 4069 aa19.55■□□□□ 0.72
MSX1-201ENST00000382723 G3V4G9 280 aa19.55■□□□□ 0.72
MSX1-201ENST00000382723 APCSP02743 223 aa19.55■□□□□ 0.72
MSX1-201ENST00000382723 S100A8P05109 93 aa19.55■□□□□ 0.72
MSX1-201ENST00000382723 SLAQ13239 276 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms