RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 LGALS9CQ6DKI2 356 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 DLX4Q92988 240 aaPredicted RBP13.47□□□□□ -0.25
SGCB-201ENST00000381431 MSRB1Q9NZV6 116 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 SMIM2Q9BVW6 85 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 I3L2K1 104 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 LY6G5BQ8NDX9 201 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 DPH3Q96FX2 82 aa13.47□□□□□ -0.25
SGCB-201ENST00000381431 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 SP5Q6BEB4 398 aaPredicted RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 INSP01308 110 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 TCF15Q12870 199 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 CST9LQ9H4G1 147 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 RBMY1BA6NDE4 496 aaKnown RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 RBMY1EA6NEQ0 496 aaKnown RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 RBMY1DP0C7P1 496 aaKnown RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 RBMY1A1P0DJD3 496 aaKnown RBP13.46□□□□□ -0.25
SGCB-201ENST00000381431 RBMY1CP0DJD4 496 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 NBL1P41271 181 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.25
SGCB-201ENST00000381431 LTBP2Q14767 1821 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 PAX4O43316 350 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 ETDBQ3ZM63 59 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 ZNF295-AS1Q8N0V1 137 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
SGCB-201ENST00000381431 TRPT1Q86TN4 253 aaKnown RBP13.44□□□□□ -0.26
SGCB-201ENST00000381431 OR11H6Q8NGC7 330 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 GNRH2O43555 120 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 PRADC1Q9BSG0 188 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 IGHV1OR15-1A0A075B7D0 117 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 KIR2DL5BA0A0G2JN68 375 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 KIR2DL5BA0A0G2JPC4 375 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 KIR2DL5AQ8N109 375 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 WIPF2Q8TF74 440 aaPredicted RBP13.44□□□□□ -0.26
SGCB-201ENST00000381431 COL4A4P53420 1690 aaPredicted RBP13.44□□□□□ -0.26
SGCB-201ENST00000381431 BRCA2P51587 3418 aa13.44□□□□□ -0.26
SGCB-201ENST00000381431 IGHV3-38A0A0C4DH36 116 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 CENPVL3A0A0U1RRI6 287 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 OCIAD2Q56VL3 154 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 CFHR4Q92496 578 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 CTSGP08311 255 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 HOXB4P17483 251 aaPredicted RBP13.43□□□□□ -0.26
SGCB-201ENST00000381431 CDKN1BP46527 198 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 CFHR3Q02985 330 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 C1orf122Q6ZSJ8 110 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 NCKAP5O14513 1909 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 F8VRH5 84 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 IGLV1-47P01700 117 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
SGCB-201ENST00000381431 C22orf34Q6ZV56 151 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 PCP2Q8IVA1 136 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 C9JAW5 83 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 BLCAPP62952 87 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 PMVKQ15126 192 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 GTSF1Q8WW33 167 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 GATA3P23771 443 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 ATXN8Q156A1 80 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 CR1LQ2VPA4 569 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 ARHGAP32A7KAX9 2087 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 P0C879 139 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 TMEM86BQ8N661 226 aa13.42□□□□□ -0.26
SGCB-201ENST00000381431 IGF2BP2-AS1Q96M15 143 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 IGHV4-61A0A0C4DH41 118 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 K7ERJ3 54 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 TMEM131Q92545 1883 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 IGLV11-55A0A075B6I3 123 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 IGHV7-4-1A0A0J9YVY3 117 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 GAGE12JA6NER3 117 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 C9orf118A6NHY6 69 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 GAGE1Q13065 139 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 GAGE4Q13068 117 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 GAGE5Q13069 117 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 C6orf226Q5I0X4 101 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 C2orf82Q6UX34 121 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
SGCB-201ENST00000381431 KLF5Q13887 457 aaPredicted RBP13.4□□□□□ -0.26
SGCB-201ENST00000381431 RASL10AQ92737 203 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 IGHV4-59P01825 116 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 AMTNQ6UX39 209 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 TRAV8-3A0A0A6YYJ7 113 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 TRAV8-4A0A0B4J246 113 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 IGLV2-23P01705 113 aa13.4□□□□□ -0.26
SGCB-201ENST00000381431 CKS1BP61024 79 aa13.4□□□□□ -0.27
SGCB-201ENST00000381431 PKD1L2Q7Z442 2459 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 ANAPC13Q9BS18 74 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 FN1P02751 2386 aaKnown RBP13.39□□□□□ -0.27
SGCB-201ENST00000381431 MYMXA0A1B0GTQ4 84 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
SGCB-201ENST00000381431 CGB3P0DN86 165 aa13.38□□□□□ -0.27
SGCB-201ENST00000381431 CGB7P0DN87 165 aa13.38□□□□□ -0.27
SGCB-201ENST00000381431 RNASE13Q5GAN3 156 aaKnown RBP13.38□□□□□ -0.27
SGCB-201ENST00000381431 PRAC2D3DTV9 90 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms