RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 BUB3O43684 328 aa10.96□□□□□ -0.65
CLCN4-201ENST00000380829 HLA-DMBP28068 263 aa10.96□□□□□ -0.65
CLCN4-201ENST00000380829 FXYD2P54710 66 aa10.96□□□□□ -0.65
CLCN4-201ENST00000380829 IGKV2-40A0A087WW87 121 aaPredicted RBP10.96□□□□□ -0.66
CLCN4-201ENST00000380829 FAM223BA6NKX1 122 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 ZNF785A8K8V0 405 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 IGKV2D-40P01614 121 aaPredicted RBP10.96□□□□□ -0.66
CLCN4-201ENST00000380829 TRBV12-3P01733 135 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 IGHV4-59P01825 116 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 GCSHP23434 173 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 WFDC2Q14508 124 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 FAM223AQ8IWN6 122 aa10.96□□□□□ -0.66
CLCN4-201ENST00000380829 BAHCC1Q9P281 2608 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 PPIFP30405 207 aaKnown RBP10.95□□□□□ -0.66
CLCN4-201ENST00000380829 CSN1S1P47710 185 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 FA2HQ7L5A8 372 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 SH2D6Q7Z4S9 175 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 TTTY13Q9BZ97 58 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 IGHV3-11P01762 117 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
CLCN4-201ENST00000380829 DEFB113Q30KQ7 82 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 PRSS3P2Q8NHM4 247 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 C8orf49Q96NF6 230 aa10.95□□□□□ -0.66
CLCN4-201ENST00000380829 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 OR9G4Q8NGQ1 327 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 SPANXB1Q9NS25 103 aaPredicted RBP10.94□□□□□ -0.66
CLCN4-201ENST00000380829 IGHG4P01861 327 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 PF4V1P10720 104 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 ARL3P36405 182 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 INSL3P51460 131 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 METTL26Q96S19 204 aa10.94□□□□□ -0.66
CLCN4-201ENST00000380829 APCP25054 2843 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 IGHV4-31P0DP07 118 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 OR4X2Q8NGF9 303 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 TMEM190Q8WZ59 177 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 VGLL1Q99990 258 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 J3QLI3 93 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 CT83Q5H943 113 aa10.93□□□□□ -0.66
CLCN4-201ENST00000380829 SPAG8Q99932 426 aaPredicted RBP10.93□□□□□ -0.66
CLCN4-201ENST00000380829 CRIP1P50238 77 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 RNF182Q8N6D2 247 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 Q8TAT8 98 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
CLCN4-201ENST00000380829 CR1P17927 2039 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 UNQ9165/PRO28630Q6UXU0 137 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 DPF1Q92782 380 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 TPPP3Q9BW30 176 aa10.92□□□□□ -0.66
CLCN4-201ENST00000380829 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
CLCN4-201ENST00000380829 HIST2H2BCQ6DN03 193 aa10.91□□□□□ -0.66
CLCN4-201ENST00000380829 FOXI2Q6ZQN5 318 aa10.91□□□□□ -0.66
CLCN4-201ENST00000380829 Q96MF0 132 aa10.91□□□□□ -0.66
CLCN4-201ENST00000380829 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
CLCN4-201ENST00000380829 NHP2Q9NX24 153 aaKnown RBP10.91□□□□□ -0.66
CLCN4-201ENST00000380829 H3BMG7 143 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 HAX1O00165 279 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 DKK2Q9UBU2 259 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 AGRNO00468 2067 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 GCN1Q92616 2671 aaKnown RBP10.9□□□□□ -0.66
CLCN4-201ENST00000380829 IGKV2D-26A0A0A0MRZ7 120 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 LGALS9BQ3B8N2 356 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 AMTNQ6UX39 209 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 USMG5Q96IX5 58 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 GFRA4Q9GZZ7 299 aa10.9□□□□□ -0.66
CLCN4-201ENST00000380829 PRAC2D3DTV9 90 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 H3BUA1 57 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 SIVA1O15304 175 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 MXRA5Q9NR99 2828 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 TCTEX1D4Q5JR98 221 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 SIGLEC8Q9NYZ4 499 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 U3KQE9 123 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 CREBBPQ92793 2442 aa10.89□□□□□ -0.67
CLCN4-201ENST00000380829 CFHR3Q02985 330 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 ERCC8Q13216 396 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 C10orf99Q6UWK7 81 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 LRRC75A-AS1Q8N1F1 130 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 PHLDA1Q8WV24 401 aaPredicted RBP10.88□□□□□ -0.67
CLCN4-201ENST00000380829 MRAP2Q96G30 205 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 PRR25Q96S07 402 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 CCDC168Q8NDH2 2452 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 TEX15Q9BXT5 2789 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 A0A1B0GUT8 65 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 D6R8Y8 96 aa10.88□□□□□ -0.67
CLCN4-201ENST00000380829 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 J3QR89 54 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 BRI3O95415 125 aa10.87□□□□□ -0.67
CLCN4-201ENST00000380829 C8orf86Q6ZUL3 223 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms