RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
PRPF40B-202ENST00000380281 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
PRPF40B-202ENST00000380281 ORMDL3Q8N138 153 aa9.68□□□□□ -0.86
PRPF40B-202ENST00000380281 KAAG1Q9UBP8 84 aa9.68□□□□□ -0.86
PRPF40B-202ENST00000380281 VPS13CQ709C8 3753 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 TGFAP01135 160 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 ODF1Q14990 250 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 FOXC2Q99958 501 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 CLEC3BP05452 202 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
PRPF40B-202ENST00000380281 TRAV40A0A0B4J280 105 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 IGKCP01834 107 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 PSMB2P49721 201 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 Q6AWC8 147 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 TMEM219Q86XT9 240 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 UTP20O75691 2785 aaKnown RBP9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 TMEM8BA6NDV4 472 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 LEPP41159 167 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 WNK1Q9H4A3 2382 aa9.66□□□□□ -0.86
PRPF40B-202ENST00000380281 BRI3O95415 125 aa9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 PAX8Q06710 450 aa9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 SONP18583 2426 aaKnown RBP9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 IL17RELQ6ZVW7 336 aa9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 PRR25Q96S07 402 aa9.65□□□□□ -0.86
PRPF40B-202ENST00000380281 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 TCF15Q12870 199 aa9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 C15orf32Q32M92 178 aa9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 CFAP126Q5VTH2 177 aa9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 ZFP2Q6ZN57 461 aa9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 TIMD4Q96H15 378 aa9.65□□□□□ -0.87
PRPF40B-202ENST00000380281 FLNCQ14315 2725 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 ZFAND6Q6FIF0 208 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 VMO1Q7Z5L0 202 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 HIF1ANQ9NWT6 349 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 TMEM14CQ9P0S9 112 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 NACAE9PAV3 2078 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 A0A1B0GW15 77 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 CCDC179H3BU77 68 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 NHLRC4P0CG21 123 aaPredicted RBP9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 PVRIGQ6DKI7 326 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 TEX29Q8N6K0 151 aa9.64□□□□□ -0.87
PRPF40B-202ENST00000380281 ZANQ9Y493 2812 aa9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 H3BVH4 76 aa9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 CTSGP08311 255 aa9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 ZFP36P26651 326 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
PRPF40B-202ENST00000380281 NDUFA3O95167 84 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 TRGV3P03979 118 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 C8orf31Q8N9H6 132 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 SMAD5-AS1Q9Y6J3 95 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 F8W735 103 aaPredicted RBP9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
PRPF40B-202ENST00000380281 DPM2O94777 84 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 CFHR4Q92496 578 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 IGF1P05019 195 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 SRD5A1P18405 259 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 HOXA3O43365 443 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 ZNF493Q6ZR52 646 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 DLX4Q92988 240 aaPredicted RBP9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 AJUBAQ96IF1 538 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 ZMAT4Q9H898 229 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 U3KQK5 164 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
PRPF40B-202ENST00000380281 SCGB2A1O75556 95 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 IGHV3-11P01762 117 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 EFNA4P52798 201 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 ATP6V0E1O15342 81 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 C3orf56Q8N813 242 aa9.6□□□□□ -0.87
PRPF40B-202ENST00000380281 M0R381 172 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 PRTN3P24158 256 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 LRRK2Q5S007 2527 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 TNFRSF6BO95407 300 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 IGHV7-81A0A0B4J1V7 117 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 LY6EQ16553 131 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 SPANXN1Q5VSR9 72 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 BRD3OSQ6XYD6 125 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 PPDPFLQ8WWR9 84 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 VKORC1Q9BQB6 163 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms